|   |
149 | 150 | . | . | . | . | . | . | . | |
|
|
|
. | . | 160 | |
|
|
|
. | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
| . | . | . | . |
|
|
| . | . | . | . |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | Q | L | K | L | G | A | S | L | . |
. |
. |
. |
D | G | R | . |
. |
. |
. |
T | A | M | A | S | G | E | S | Q | W | I | T | S | P | Q | A | R | R | D | V | Q | L | L | R | A | Q | S | H | A | I | L | T | S | S | A | T | V | L | A | D | D | P | A | L | T | V | R | W | S | E | L | D | E | Q | T | Q | A | L | Y | P |
Query Conservation |   |
|   |
|
|   |
|   |
|
| . | . | . | . |
|
|   | . | . | . | . |
|
|   |   |   |
|   |
|   |
|
|
|   |   |   |
|
|   |   |   |   |   |
|
|
|   |   |
|
|
|
|
|
|   |   |
|   |   |   |
|
|
|   |
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
| . | . | . | . |
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |
Template Conservation |   |
|   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
| . |
|   |   |
|   |
|
|
|   |   |
|   |   |
|
|   |   |
|
|   |   |
|   |
| . |   |   |
|
|
|
|
|
|
|
|
|
|
|
|   |   |
|
|   |
| . | . | . | . | . | . | . | . | . | . | . | . | . |
Template Sequence |   |
I | K | L | V | F | R | Y | S | P | T | K | T | V | D | G | F | N | E | L | A | F | . |
G | L | G | D | G | L | P | W | G | R | V | K | K | D | L | Q | N | F | K | A | R | T | E | G | . |
T | I | M | I | M | G | A | K | T | F | Q | S | L | P | T | L | L | P | G | R | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
| T | T | S |
|  |  |  |  |  | . |  | B | T | T | B |
| T | T |
|
|
|  |  |  |  |  |  |  |  |  |  |  | T | T | . | S |  |  |  |  |  |  |  |  |  |  | T |
| S | S |
|
| T | T | S | . | . | . | . | . | . | . | . | . | . | . | . | . |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |
|
| . |
|  |  |  |  |  |
|
|
|  |  |  |
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | |
. | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | |
. | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
  |
  |   |
221 | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | Q | N | L | R | Q | P | I | R | I | V | I | D | S | Q | N | R | V | T | P | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
V | H | R | I | V | Q | Q | P | G | E | T | W | F | A | R | T | Q | E | D | S | R | E | W | P | E | T | V | R | T | L | L | I | P | E | H | K | G | H | L | D | L | V | V | L | M |
Query Conservation |   |
  |   |   |   |   |
|
|   |
|
|
|
|
|   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |
|   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |
|
Alig confidence |   |
. | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Template Conservation |   |
. | . | . | . | . | . | . |   |
|
|
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Template Sequence |   |
. |
. |
. |
. |
. |
. |
. |
S | H | I | V | V | C | D | L | A | R | D | Y | P | V | T | K | D | G | D | L | A | H | F | Y | I | T | W | E | Q | Y | I | T | Y | I | S | G | G | E | I | Q | V | S | S | P | N | A | P | F | E | T | M | L | D | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Template Known Secondary structure |   |
. | . | . | . | . | . | . |
|  |  |  |  |
|
| T | T | S |
|
|
|
|
| T | T |
|
|
|
| S |  |  |  |
|  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |
| T | T | S | S |
|  |  |  |  |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Template Predicted Secondary structure |   |
. | . | . | . | . | . | . |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
|
|
|
|
|
|
|
67 | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |
  |   |
286 | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | Q | L | G | K | Q | Q | I | N | S | I | W | V | E | A | G | P | T | L | A | G | A | L | L | Q | A | G | L | V | D | E | L | I | V | Y | I | A | P | K |
Query Conservation |   |
  |   |
|   |   |   |
|
|   |   |
|
|
|
|
|
|   |   |
|   |   |
|
|
|   |
|
|
|
|
|
|
|   |
|   |
|
|
|   |
Alig confidence |   |
. | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
. | . | . | . | . | . |   |   |   |   |
|
|
|
|
|
|   |   |
|
|   |   |   |
| . | . |   |   |   |
|   |
|   |
|
|   |
|   |   |
Template Sequence |   |
. |
. |
. |
. |
. |
. |
Q | N | S | K | V | S | V | I | G | G | P | A | L | L | Y | A | A | L | . |
. |
P | Y | A | D | E | V | V | V | S | R | I | V | K |
Template Known Secondary structure |   |
. | . | . | . | . | . | T | T | S |
|  |  |  |  |  |
|  |  |  |  |  |  |  | G | . | . | G | G |
| S |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
. | . | . | . | . | . |
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  | . | . |  |  |
|
|  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
|
|
|
|
|
|
120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | |
|
. | . | 140 | . | . | . | . | . | . | . | . | . | 150 |
  |