 |
Job Description | P25539 | Confidence | 74.95% | Date | Thu Jan 5 11:42:04 GMT 2012 |
Rank | 71 | Aligned Residues | 112 |
% Identity | 13% | Template | d1j5ta_ |
SCOP info | TIM beta/alpha-barrel
| Ribulose-phoshate binding barrel
| Tryptophan biosynthesis enzymes
|
Resolution | 3.00 |
|
 |
  |   |
85 | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
| . | . | . | . | . |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
Query Sequence |   |
C | D | A | L | I | A | A | G | V | A | R | V | V | A | S | M | Q | D | P | N | P | Q | V | A | G | R | G | L | Y | R | L | Q | Q | A | G | I | D | V | S | H | G | L | M | M | S | E | A | E | Q | L | N | K | G | F | L | K | R | M | R | T | G | F | P | Y | I | Q | L | K | L | G | A | S | L | D | G | . |
. |
. |
. |
. |
Query Conservation |   |
  |   |   |
|   |   |   |
|
|   |   |
|
|   |   |   |   |
|
|   |   |   |   |   |
|   |
|   |   |   |
|   |   |   |
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|   |
|
|   |
|   |
|
|
|
| . | . | . | . | . |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
Template Conservation |   |
|   |   |
|   |   |   |
|
|
|   |
|
|
|
|   |   |   |
|   |   |
|   |
|   |   |
|   |   |   |
|   |   |   |
|
|   |   |
|
|   |
| . | . | . | . | . | . |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |
|
|
|
|   |   |   |   |   |   |   |   |   |   |
|   |
Template Sequence |   |
V | K | L | A | S | S | V | G | A | D | A | I | L | I | I | A | R | I | L | T | A | E | Q | I | K | E | I | Y | E | A | A | E | E | L | G | M | D | S | L | V | E | V | . |
. |
. |
. |
. |
. |
H | S | R | E | D | L | E | K | V | F | S | V | I | R | P | K | I | I | G | I | N | T | R | D | L | D | T | F | E | I | K | K |
Template Known Secondary structure |   |
 |  |  |  |  |  | T | T |
| S |  |  |  |  |  | G | G | G | S |
|  |  |  |  |  |  |  |  |  |  |  |  | T | T | T |
|  |  |  |  |  |  | . | . | . | . | . | . | S | S |  |  |  |  |  |  |  |  |  |  |
|
|
| S |  |  |  |  |
|
|
| S |
|
|
|  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
| . | . | . | . | . | . |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
95 | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | |
|
|
|
|
|
. | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . |
  |
  |   |
|
|
|
|
|
|
|
160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . |
Predicted Secondary structure |   |
. | . | . | . | . | . | . |
|  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |
|  |  |  |  |  |
|
|
|
|
Query SS confidence |   |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
. |
. |
. |
. |
. |
. |
. |
R | T | A | M | A | S | G | E | S | Q | W | I | T | S | P | Q | A | R | R | D | V | Q | L | L | R | A | Q | S | H | A | I | L | T | S | S | A | T | V | L | A | D | D | P |
Query Conservation |   |
. | . | . | . | . | . | . |   |
|
|   |   |   |
|   |
|   |
|
|
|   |   |   |
|
|   |   |   |   |   |
|
|
|   |   |
|
|
|
|
|
|   |   |
|   |   |   |
|
|
|
Alig confidence |   |
. | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |
|   |   |   |
|   |   |   |   |
|
|
|
|   |
|
|
|   |   |   |
|   |
|   |   |
|   |   |
|
|
|
|
|
|
|
|
|
|
|   |   |
|   |
|
|
Template Sequence |   |
N | V | L | W | E | L | L | P | L | V | P | D | D | T | V | V | V | A | E | S | G | I | K | D | P | R | E | L | K | D | L | R | G | K | V | N | A | V | L | V | G | T | S | I | M | K | A | E | N | P |
Template Known Secondary structure |   |
 |  |  |  |  |  | G | G | G | S |
| T | T | S |  |  |  |  |  | S |
|
| S | S | G | G | G |  |  |  |  | T | T | T |
| S |  |  |  |  | S |  |  |  |  | T | S | S | S |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
169 | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|