Job Description P25539 Confidence 97.12% Date Thu Jan 5 11:42:04 GMT 2012 Rank 60 Aligned Residues 108 % Identity 25% Template c3dmoD_ PDB info PDB header:hydrolase Chain: D: PDB Molecule:cytidine deaminase; PDBTitle: 1.6 a crystal structure of cytidine deaminase from2 burkholderia pseudomallei Resolution 1.60 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.					.	.	.	50	.	.	.	.	.	.	.	.	.				60	.	.	.	.	.	.	.	.	.	70
Predicted Secondary structure																																																.	.	.	.														.	.	.												.	.	.
Query SS confidence																																																.	.	.	.														.	.	.												.	.	.
Query Sequence		M	Q	D	E	Y	Y	M	A	R	A	L	K	L	A	Q	R	G	R	F	T	T	H	P	N	P	N	V	G	C	V	I	V	K	D	G	E	I	V	G	E	G	Y	H	Q	R	A	.	.	.	.	G	E	P	H	A	E	V	H	A	L	R	M	A	.	.	.	G	E	K	A	K	G	A	T	A	Y	V	.	.	.
Query Conservation																																																.	.	.	.														.	.	.												.	.	.
Alig confidence																								.																								.	.	.	.														.	.	.												.	.	.
Template Conservation																								.
Template Sequence		M	T	H	H	A	L	I	E	A	A	K	A	A	R	E	K	A	Y	A	P	Y	S	.	N	F	K	V	G	A	A	L	V	T	N	D	G	K	V	F	H	G	C	N	V	E	N	A	S	Y	G	L	C	N	C	A	E	R	T	A	L	F	S	A	L	A	A	G	Y	R	P	G	E	F	A	A	I	A	V	V	G
Template Known Secondary structure																T	T		B		T	T	T	.											T	T	S								B			S	S	G	G	G		B													T	T			T	T
Template Predicted Secondary structure																								.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.		.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
						71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
Predicted Secondary structure		.	.	.	.
Query SS confidence		.	.	.	.
Query Sequence		.	.	.	.	T	L	E	P	C	S	H	H	G	R	T	P	P	C	C	D	A	L	I	A	A	G	V	A	R	V	V	A	S	M	Q	D	P	N	P	Q	V	A	G	R	G	L	Y	R	L
Query Conservation		.	.	.	.
Alig confidence		.	.	.	.								.	.	.	.	.	.
Template Conservation													.	.	.	.	.	.
Template Sequence		E	T	H	G	P	I	A	P	C	G	A	.	.	.	.	.	.	C	R	Q	V	M	I	E	L	G	K	P	T	L	E	V	V	L	T	N	M	Q	G	D	V	R	V	T	S	A	G	D	L
Template Known Secondary structure		S		S	S	S							.	.	.	.	.	.											T	T								T	T	S
Template Predicted Secondary structure													.	.	.	.	.	.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90							.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions