Job Description P25539 Confidence 98.69% Date Thu Jan 5 11:42:04 GMT 2012 Rank 50 Aligned Residues 133 % Identity 14% Template c3clbA_ PDB info PDB header:oxidoreductase, transferase Chain: A: PDB Molecule:dhfr-ts; PDBTitle: structure of bifunctional tcdhfr-ts in complex with tmq Resolution 3.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.													.	190	.	.	.	.	.	.	.	.	.	200	.	.	.				.	.	.	.	.	.	210
Predicted Secondary structure																																													.	.	.	.	.	.	.	.	.	.	.	.																.	.	.
Query SS confidence																																													.	.	.	.	.	.	.	.	.	.	.	.																.	.	.
Query Sequence		F	P	Y	I	Q	L	K	L	G	A	S	L	D	G	R	T	A	M	A	S	G	E	S	Q	W	I	T	S	P	Q	A	R	R	D	V	Q	L	L	R	A	Q	S	H	.	.	.	.	.	.	.	.	.	.	.	.	A	I	L	T	S	S	A	T	V	L	A	D	D	P	A	.	.	.	L	T	V	R	W	S	E
Query Conservation																																													.	.	.	.	.	.	.	.	.	.	.	.																.	.	.
Alig confidence																					.						.																		.	.	.	.	.	.	.	.	.	.	.	.																.	.	.					.	.	.
Template Conservation																					.						.																																																				.	.	.
Template Sequence		L	R	A	F	S	L	V	V	A	V	D	E	R	G	G	I	G	D	G	.	R	S	I	P	W	.	N	V	P	E	D	M	K	F	F	R	D	V	T	T	K	L	R	G	K	N	V	K	P	S	P	A	K	R	N	A	V	V	M	G	R	K	T	W	D	S	I	P	P	K	F	R	P	L	P	G	R	.	.	.
Template Known Secondary structure													T	T					S	S	.	S	S		S		.																	S	S	S	S				B	T	T	B														S		G	G	G		S		T	T		.	.	.
Template Predicted Secondary structure																					.						.																																																				.	.	.
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.		.	40	.	.	.		.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
Predicted Secondary structure
Query SS confidence
Query Sequence		L	D	E	Q	T	Q	A	L	Y	P	Q	Q	N	L	R	Q	P	I	R	I	V	I	D	S	Q	N	R	V	T	P	V	H	R	I	V	Q	Q	P	G	E	T	W	F	A	R	T	Q	E	D	S	R	E	W	P	E	T	V	R	T	L	L	I	P	E	H	K	G	H	L	D	L	V	V	L	M	M	Q	L	G	K
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	N	V	V	L	S	S	T	L	T	T	Q	H	L	L	D	G	L	P	D	E	H	A	D	S	I	V	A	V	N	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	L	E	Q	A	L	Q	L	L	A	S
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							S	S							S	S	S	S	S											S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									T	T	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																			95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.																						.	.	.	.	130	.	.	.	.	.	.
		291					.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.				.	.	.	.	.	.	.	320	.
Predicted Secondary structure			.	.	.	.																						.	.	.
Query SS confidence			.	.	.	.																						.	.	.
Query Sequence		Q	.	.	.	.	Q	I	N	S	I	W	V	E	A	G	P	T	L	A	G	A	L	L	Q	A	G	.	.	.	L	V	D	E	L	I	V	Y	I
Query Conservation			.	.	.	.																						.	.	.
Alig confidence			.	.	.	.																						.	.	.
Template Conservation
Template Sequence		P	N	Y	T	P	S	I	E	T	V	Y	C	I	G	G	G	S	V	Y	A	E	A	L	R	P	P	C	V	H	L	L	Q	A	I	Y	R	T	T
Template Known Secondary structure		T	T	T	T	T	T																	T	S	T	T	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions