Return to main results Retrieve Phyre Job Id

Job DescriptionP25539
Confidence100.00%DateThu Jan 5 11:42:04 GMT 2012
Rank6Aligned Residues228
% Identity16%Templatec2p4gA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:hypothetical protein; PDBTitle: crystal structure of a pyrimidine reductase-like protein (dip1392)2 from corynebacterium diphtheriae nctc at 2.30 a resolution
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   132.......140.........150.........160.........170.........180.........190.........200.........210.
Predicted Secondary structure 




































Query SS confidence 















































































Query Sequence  EQLNKGFLKRMRTGFPYIQLKLGASLDGRTAMASGESQWITSPQARRDVQLLRAQSHAILTSSATVLADDPALTVRWSEL
Query Conservation                

 
 

 
 



 

   
 
 


   

     


  





  
   


 

 
    
Alig confidence 




























.













































...
Template Conservation          
     

 
    
 




.    
 
  
         
 


  





  

  
       ... 
Template Sequence  EQIVYGALPLTTINEPECRAIAITSINGS. ATLSGVSGPXGDQTDADLLIQLRGWADAIVVGAETARKENYGPVVL. . . P
Template Known Secondary structure  SS

T

TTSB.S
BTTBSGGG


STT

S


...
Template Predicted Secondary structure 












.





















...
Template SS confidence 















































































   18.20.........30.........40...... ...50.........60.........70.........80.........90.. .
 
   212.......220.........230.........240......... 250.........260.. .......270.........
Predicted Secondary structure 





























....





........








Query SS confidence 





































. . . .












. . . . . . . .
















Query Sequence  DEQTQALYPQQNLRQPIRIVIDSQNRVTPVHRIVQQPG. . . . ETWFARTQEDSRE. . . . . . . . WPETVRTLLIPEHKGHL
Query Conservation                

 




           
    ....  

         ........                 
Alig confidence 





































....












........
















Template Conservation        
   
    
  


     
                  
 
                
       
       
Template Sequence  HGIKNQRQKLGRCGLPKLTLLSKSLYFDFSSELFSPDLPSELSPLVITQQPANNSEQWDQRLQKLIDVGVEVIVAPTSTN
Template Known Secondary structure  TT

SS

SS



TTSGGG
TTS
GGGS


SS

T


SSS
Template Predicted Secondary structure 














































Template SS confidence 















































































   94.....100.........110.........120.........130.........140.........150.........160.........170...
 
   280.........290.........300.........310.........320.........330.........340.........350.........
Predicted Secondary structure 




































Query SS confidence 















































































Query Sequence  DLVVLMMQLGKQQINSIWVEAGPTLAGALLQAGLVDELIVYIAPKLLGSDARGLCTLPGLEKLADAPQFKFKEIRHVGPD
Query Conservation 

   
  
   

  





  
  


 






 
 


 


          
         
 
     

 
Alig confidence 










































































.



Template Conservation 

   
  
   

  





  
  


  





 
 


 



   
             
 
  
   .  
 
Template Sequence  PLKIAFDALHARRLKKISIEGGPSVYRQALSLGIVDRLHLTIAPNIICPVESPLFGKISDDSFTTRLVLEXLSSS. PNGL
Template Known Secondary structure  TTT


T


S


SS
SSBTT
S
TTS





.TT

Template Predicted Secondary structure 


































.


Template SS confidence 















































































   174.....180.........190.........200.........210.........220.........230.........240........ .250..
 
   360....
Predicted Secondary structure 
Query SS confidence 




Query Sequence  VCLHL
Query Conservation 
 
 
Alig confidence 




Template Conservation 
 


Template Sequence  IFSRY
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 




   253....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions