Return to main results Retrieve Phyre Job Id

Job DescriptionP25539
Confidence100.00%DateThu Jan 5 11:42:04 GMT 2012
Rank12Aligned Residues138
% Identity28%Templatec2nx8A_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:trna-specific adenosine deaminase; PDBTitle: the crystal structure of the trna-specific adenosine deaminase from2 streptococcus pyogenes
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.... .....50......... 60.........70..
Predicted Secondary structure 














....





.....



Query SS confidence 










































. . . .














. . . . .












Query Sequence  QDEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQ. . . . RAGEPHAEVHALRMA. . . . . GEKAKGATAYVTL
Query Conservation   
   
  
   
         

 





    

  
   ....  
  


  
   
.....       





Alig confidence 

















..






















....














.....












Template Conservation       
  

  
  
  ..    






    

  
 
          


  

  
        
   


 
 
Template Sequence  EQTYFMQEALKESEKSLQ. . KAEIPIGCVIVKDGEIIGRGHNAREESNQAIMHAEMMAINEANAHEGNWRLLDTTLFVTI
Template Known Secondary structure  ..TTS


TT

T
TT

TSS

TT
Template Predicted Secondary structure  ..

























Template SS confidence 















































































   15....20.........30.. .......40.........50.........60.........70.........80.........90..
 
   73......80.........90.........100.........110...... ...120.........130.........140.......
Predicted Secondary structure 
























....










Query SS confidence 











































. . . .






























Query Sequence  EPCSHHGRTPPCCDALIAAGVARVVASMQDPNPQVAGRGLYRLQ. . . . QAGIDVSHGLMMSEAEQLNKGFLKRMRTGFP
Query Conservation 


   
 

 
   
   

  

    

     
 
   
 ....  

 
                       

Alig confidence 


......


































....






























Template Conservation 


...... 

  

   

 




  
   
                   
  


  
   

  

   
 
  
Template Sequence  EPC. . . . . . VMCSGAIGLARIPHVIYGASNQKFGGVDSLYQILTDERLNHRVQVERGLLAADCANIMQTFFRQGRERKK
Template Known Secondary structure 

B......TT



TTTBTTTTS

GGG
TTTT



TT
Template Predicted Secondary structure 


......

























Template SS confidence 














































































   93.. ....100.........110.........120.........130.........140.........150.........160.....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions