Job Description P25539 Confidence 100.00% Date Thu Jan 5 11:42:04 GMT 2012 Rank 3 Aligned Residues 340 % Identity 34% Template c2hxvA_ PDB info PDB header:biosynthetic protein Chain: A: PDB Molecule:diaminohydroxyphosphoribosylaminopyrimidine deaminase/ 5- PDBTitle: crystal structure of a diaminohydroxyphosphoribosylaminopyrimidine2 deaminase/ 5-amino-6-(5-phosphoribosylamino)uracil reductase (tm1828)3 from thermotoga maritima at 1.80 a resolution Resolution 1.80 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.				60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																											.	.	.
Query SS confidence																																																											.	.	.
Query Sequence		D	E	Y	Y	M	A	R	A	L	K	L	A	Q	R	G	R	F	T	T	H	P	N	P	N	V	G	C	V	I	V	K	D	G	E	I	V	G	E	G	Y	H	Q	R	A	G	E	P	H	A	E	V	H	A	L	R	M	A	.	.	.	G	E	K	A	K	G	A	T	A	Y	V	T	L	E	P	C	S	H	H	G
Query Conservation																																																											.	.	.
Alig confidence																																																											.	.	.
Template Conservation
Template Sequence		Y	E	T	F	X	K	R	A	I	E	L	A	K	K	G	L	G	R	V	N	P	N	P	P	V	G	A	V	V	V	K	D	G	R	I	I	A	E	G	F	H	P	Y	F	G	G	P	H	A	E	R	X	A	I	E	S	A	R	K	K	G	E	D	L	R	G	A	T	L	I	V	T	L	E	P	C	D	H	H	G
Template Known Secondary structure															T	T	T	T	T	S	T	T	S										T	T										S	T	T	S														T	T				T	T												S		S
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	T	P	P	C	C	D	A	L	I	A	A	G	V	A	R	V	V	A	S	M	Q	D	P	N	P	Q	V	A	G	R	G	L	Y	R	L	Q	Q	A	G	I	D	V	S	H	G	L	M	M	S	E	A	E	Q	L	N	K	G	F	L	K	R	M	R	T	G	F	P	Y	I	Q	L	K	L	G	A	S	L	D	G
Query Conservation
Alig confidence																												.
Template Conservation																												.
Template Sequence		K	T	P	P	C	T	D	L	I	I	E	S	G	I	K	T	V	V	I	G	T	R	D	P	N	P	.	V	S	G	N	G	V	E	K	F	R	N	H	G	I	E	V	I	E	G	V	L	E	E	E	V	K	K	L	C	E	F	F	I	T	Y	V	T	K	K	R	P	F	V	A	L	K	Y	A	S	T	L	D	G
Template Known Secondary structure		S	S											T													G	.	G	G									T	T	T							T	T								T										S	S											T	T	S
Template Predicted Secondary structure																												.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.		.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	T	A	M	A	S	G	E	S	Q	W	I	T	S	P	Q	A	R	R	D	V	Q	L	L	R	A	Q	S	H	A	I	L	T	S	S	A	T	V	L	A	D	D	P	A	L	T	V	R	W	S	E	L	D	E	Q	T	Q	A	L	Y	P	Q	Q	N	L	R	Q	P	I	R	I	V	I	D	S	Q	N	R	V	T
Query Conservation
Alig confidence																	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	I	A	D	H	R	G	D	S	K	W	I	T	D	K	.	L	R	F	K	V	H	E	X	R	N	I	Y	S	A	V	L	V	G	A	G	T	V	L	K	D	N	P	Q	L	T	C	R	L	K	E	.	.	.	.	.	.	.	.	.	.	.	.	.	G	R	N	P	V	R	V	I	L	D	R	K	G	V	L	S
Template Known Secondary structure						T	T	S			T	T	S		S	T	.	T											S	S																				S	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	S										T	T		T	T	T
Template Predicted Secondary structure																	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.		.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210														.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	V	H	R	I	V	Q	Q	P	G	E	T	W	F	A	R	T	Q	E	D	S	R	E	W	P	E	T	V	R	T	L	L	I	P	E	H	K	G	H	L	D	L	V	V	L	M	M	Q	L	G	K	Q	Q	I	N	S	I	W	V	E	A	G	P	T	L	A	G	A	L	L	Q	A	G	L	V	D	E	L	I	V
Query Conservation
Alig confidence																																		.	.	.	.	.																																		.	.
Template Conservation																																		.	.	.	.	.																																		.	.
Template Sequence		G	K	V	F	R	V	F	E	E	N	A	R	V	I	V	F	T	E	S	E	E	A	E	Y	P	P	H	V	E	K	A	L	.	.	.	.	.	S	D	C	S	V	E	S	I	L	R	N	L	Y	E	R	D	I	D	S	V	L	V	E	G	G	S	K	V	F	S	E	F	L	.	.	D	H	A	D	V	V	F	G
Template Known Secondary structure		T				G	G	G	S	S	S	S							S		S	S					T	T	S					.	.	.	.	.															T	T																	G	.	.	G	G		S
Template Predicted Secondary structure																																		.	.	.	.	.																																		.	.
Template SS confidence
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.						.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.			.	.	.	.	.	.	.	.
		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	I	A	P	K	L	L	G	S	D	A	R	G	L	C	T	L	P	G	L	E	K	L	A	D	A	P	Q	F	K	F	K	E	I	R	H	V	G	P	D	V	C	L	H	L	V	G
Query Conservation
Alig confidence																			.	.
Template Conservation																			.	.
Template Sequence		F	Y	S	T	K	I	F	G	K	G	L	D	V	F	S	G	Y	.	.	L	S	D	V	S	V	P	P	K	F	K	V	V	N	V	E	F	S	D	S	E	F	L	V	E	X	R	P
Template Known Secondary structure					S				S	S	S			T	T	T	T		.	.				T	T	S													T	T
Template Predicted Secondary structure																			.	.
Template SS confidence
		300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.			.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions