 |
Job Description | P25539 | Confidence | 21.35% | Date | Thu Jan 5 11:42:04 GMT 2012 |
Rank | 122 | Aligned Residues | 41 |
% Identity | 7% | Template | c2dgdD_ |
PDB info |
PDB header:lyase | Chain: D: PDB Molecule:223aa long hypothetical arylmalonate decarboxylase; |
PDBTitle: crystal structure of st0656, a function unknown protein from2 sulfolobus tokodaii
|
Resolution | 2.90 Å |
|
  |   |
82 | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | P | C | C | D | A | L | I | A | A | G | V | A | R | V | V | A | S | M | Q | D | P | N | P | Q | V | A | G | R | G | L | Y | R | L | Q | Q | A | G | I | D | V | S |
Query Conservation |   |
|   |
|   |   |   |
|   |   |   |
|
|   |   |
|
|   |   |   |   |
|
|   |   |   |   |   |
|   |
|   |   |   |
|   |   |   |
|
|   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|   |   |
|
|   |   |   |
|   |   |
|
|   |
|
|
|
|
|   |   | . |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |
Template Sequence |   |
E | S | V | Y | E | L | L | K | K | L | N | V | R | K | L | W | I | G | T | P | Y | I | K | . |
E | R | T | L | E | E | V | E | W | W | R | N | K | G | F | E | I | V |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  |  | S | S |
|  | . |  |  |  |  |  |  |  |  |  |  |  | T | T | T |
|  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
97 | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | |
120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|