Job Description P25539 Confidence 99.23% Date Thu Jan 5 11:42:04 GMT 2012 Rank 38 Aligned Residues 145 % Identity 18% Template c1zdrB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:dihydrofolate reductase; PDBTitle: dhfr from bacillus stearothermophilus Resolution 2.00 Å

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		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	Q	L	K	L	G	A	S	L	D	G	R	T	A	M	A	S	G	E	S	Q	W	I	T	S	P	Q	A	R	R	D	V	Q	L	L	R	A	Q	S	H	A	I	L	T	S	S	A	T	V	L	A	D	D	P	A	L	T	V	R	W	S	E	L	D	E	Q	T	Q	A	L	Y	P	Q	Q	N	L	R	Q	P	I
Query Conservation
Alig confidence																.								.												.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																.								.												.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	S	H	I	V	A	M	D	E	N	R	V	I	G	.	K	D	N	R	L	P	W	.	H	L	P	A	D	L	A	Y	F	K	R	.	V	T	M	G	H	A	I	V	M	G	R	K	T	F	E	A	I	G	R	P	L	P	G	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D
Template Known Secondary structure										T	T					.	B	T	T	B		S		.												.			T	T	S											T	T		S			T	T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																.								.												.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.		.	.	.	.	20	.	.		.	.	.	.	.	.	.	30	.	.	.		.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.																					.
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	I	V	I	D	S	Q	N	R	V	T	P	V	H	R	I	V	Q	Q	P	G	E	T	W	F	A	R	T	Q	E	D	S	R	E	W	P	E	T	V	R	T	L	L	I	P	E	H	K	G	H	L	D	L	V	V	L	M	M	Q	L	G	K	Q	Q	I	N	S	I	W	V	E	A	G	P	T	L	A	G	A	L
Query Conservation
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Template Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Template Sequence		N	V	V	V	T	G	N	R	S	F	R	P	E	G	C	L	V	L	H	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	E	E	V	K	Q	W	I	A	S	R	A	.	D	E	V	F	I	I	G	G	A	E	L	F	R	A	T
Template Known Secondary structure					B		S		T	T				S	S				B		S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					T	T	T	S	T	T		S	.	S														T
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Template SS confidence
		59	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.																																	.	80	.	.	.	.	.	.	.	.	.	90		.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
		309	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	Q	A	G	L	V	D	E	L	I	V	Y	I	A	P	K	L	L	G	S	D	A	R	G	L	C	T	L	P	G	L	E	K	L	A	D	A	P	Q	F	K	F	K	E	I	R	H	V	G	P	D
Query Conservation
Alig confidence				.	.														.	.	.	.	.	.	.	.
Template Conservation				.	.														.	.	.	.	.	.	.	.
Template Sequence		M	P	.	.	I	V	D	R	L	Y	V	T	K	I	F	A	S	.	.	.	.	.	.	.	.	F	P	G	D	T	F	Y	P	P	I	S	D	D	E	W	E	I	V	S	Y	T	P	G	G	K	D
Template Known Secondary structure		G	G	.	.	G										S	S		.	.	.	.	.	.	.	.				S								T	T	T												B
Template Predicted Secondary structure				.	.														.	.	.	.	.	.	.	.
Template SS confidence
		106	.			.	.	110	.	.	.	.	.	.	.	.	.	120									.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions