Job Description P0ADP5 Confidence 4.54% Date Thu Jan 5 11:21:29 GMT 2012 Rank 14 Aligned Residues 86 % Identity 6% Template d1iwga8 SCOP info Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain Resolution 3.50

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		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.					.	.	.	.	.	.	.	280	.	.
Predicted Secondary structure																																																																				.	.	.	.
Query SS confidence																																																																				.	.	.	.
Query Sequence		L	V	F	L	G	V	V	A	S	G	I	G	Y	F	M	W	N	Y	G	A	T	Q	V	D	A	G	T	L	G	I	M	N	N	M	H	V	P	A	G	L	L	V	N	L	A	I	W	H	Q	Q	P	H	W	P	T	F	I	T	G	A	L	V	I	L	A	S	.	.	.	.	L	W	V	H	R	K	W	V	A	P
Query Conservation																																																																				.	.	.	.
Alig confidence																																																																				.	.	.	.
Template Conservation
Template Sequence		A	P	S	L	Y	A	I	S	L	I	V	V	F	L	C	L	A	A	L	Y	E	S	W	S	I	P	F	S	V	M	L	V	V	P	L	G	V	I	G	A	L	L	A	A	T	F	R	G	L	T	N	D	V	Y	F	Q	V	G	L	L	T	T	I	G	L	S	A	K	N	A	I	L	I	V	E	F	A	K	D	L
Template Known Secondary structure																				T	T		S	S	S					G	G	G																T	T			B
Template Predicted Secondary structure
Template SS confidence
		873	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.
		283	.	.	.	.	.	.	290	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	S	S	Q	T	A	D	D	R	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	D	K	E	G	K	G	L	I	E
Template Known Secondary structure		T	T	S	S				T	T
Template Predicted Secondary structure
Template SS confidence
		953	.	.	.	.	.	.	960	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions