Job Description P0ADP5 Confidence 7.25% Date Thu Jan 5 11:21:29 GMT 2012 Rank 9 Aligned Residues 163 % Identity 10% Template c3rkoF_ PDB info PDB header:oxidoreductase Chain: F: PDB Molecule:nadh-quinone oxidoreductase subunit j; PDBTitle: crystal structure of the membrane domain of respiratory complex i from2 e. coli at 3.0 angstrom resolution Resolution 3.00 Å

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		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	L	A	V	I	G	A	G	I	I	R	Y	D	Q	V	T	D	H	F	W	T	G	L	L	L	V	Q	L	S	N	I	T	F	A	I	G	M	V	G	Y	K	R	L	M	E	T	R	P	M	P	Q	H	N	A	F	A	W	F	Y	L	G	A	F	L	V	A	V	I	A	W	F	L	L	G	N	A	Q	K	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	A	F	Y	I	C	G	L	I	A	I	L	A	T	L	R	V	I	T	H	T	N	P	V	H	A	L	L	Y	L	I	I	S	L	L	A	I	S	G	V	F	F	S	L	G	A	Y	F	A	G	A	L	E	I	I	V	Y	A	G	A	I	M	V	L	F	V	F	V	V	M	M	L	N	L	G	G	S	E	I	E
Template Known Secondary structure																							S																						T	T											T																			S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.			.	270	.	.	.	.	.
Predicted Secondary structure																																																																									.	.
Query SS confidence																																																																									.	.
Query Sequence		P	Q	T	T	L	Q	W	G	I	L	V	F	L	G	V	V	A	S	G	I	G	Y	F	M	W	N	Y	G	A	T	Q	V	D	A	G	T	L	G	I	M	N	N	M	H	V	P	A	G	L	L	V	N	L	A	I	W	H	Q	Q	P	H	W	P	T	F	I	T	G	A	L	V	.	.	I	L	A	S	L	W	V
Query Conservation																																																																									.	.
Alig confidence																																									.	.	.	.																													.	.
Template Conservation																																									.	.	.	.
Template Sequence		Q	E	R	Q	W	L	K	P	Q	V	W	I	G	P	A	I	L	S	A	I	M	L	V	V	I	V	Y	A	I	L	G	V	N	D	Q	G	I	D	G	.	.	.	.	T	P	I	S	A	K	A	V	G	I	T	L	F	G	P	Y	V	L	A	V	E	L	A	S	M	L	L	L	A	G	L	V	V	A	F	H	V
Template Known Secondary structure					T	T		S																							T	T	S								.	.	.	.													T	T	T	S
Template Predicted Secondary structure																																									.	.	.	.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.					.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		276	.	.	.	280	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	R	K	W	V	A	P	R	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	R	E	E	R	A	G	E	V
Template Known Secondary structure								S	S
Template Predicted Secondary structure
Template SS confidence
		159	160	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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