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Job Description | P0ADP5 | Confidence | 2.83% | Date | Thu Jan 5 11:21:29 GMT 2012 |
Rank | 29 | Aligned Residues | 119 |
% Identity | 8% | Template | c3giaA_ |
PDB info |
PDB header:transport protein | Chain: A: PDB Molecule:uncharacterized protein mj0609; |
PDBTitle: crystal structure of apct transporter
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Resolution | 2.32 Å |
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49 | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
T | R | G | N | S | L | K | T | V | G | L | Y | M | L | V | G | A | M | Q | L | G | V | M | Y | M | L | S | F | R | A | Y | L | Y | L | T | V | S | E | L | L | L | F | T | V | L | T | P | L | Y | I | T | L | I | Y | D | I | M | S | K | R | R | L | R | W | G | Y | A | F | S | A | L | L | A | V | I | G | A | G | I | I |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
F | E | R | K | V | W | F | K | S | T | E | G | L | Y | I | T | S | A | L | G | V | L | F | A | L | L | F | N | M | E | G | V | A | S | I | T | S | A | V | F | M | V | I | Y | L | F | V | I | L | S | H | Y | I | . |
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L | I | D | E | V | G | G | R | K | E | I | V | I | F | S | F | I | V | V | L | G | V | F | L | L |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
312 | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | |
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. | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . |
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129 | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
R | Y | D | Q | V | T | D | H | F | W | T | G | L | L | L | V | Q | L | S | N | I | T | F | A | I | G | M | V | G | Y | K | R | L | M | E | T | R | P | M | P | Q |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
L | L | Y | Y | Q | W | I | T | N | R | F | V | F | Y | G | I | I | A | T | F | I | G | V | L | I | F | E | I | I | Y | R | K | V | T | K | R | T | F | S | N | N |
Template Known Secondary structure |   |
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| G | G |
Template Predicted Secondary structure |   |
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Template SS confidence |   |
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390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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