Return to main results Retrieve Phyre Job Id

Job DescriptionP0A7H3
Confidence100.00%DateThu Jan 5 11:05:40 GMT 2012
Rank2Aligned Residues218
% Identity17%Templatec1u5kA_
PDB info PDB header:recombination,replicationChain: A: PDB Molecule:hypothetical protein; PDBTitle: recombinational repair protein reco
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.........60.........70.........80..
Predicted Secondary structure 










































Query SS confidence 















































































Query Sequence  GWQRAFVLHSRPWSETSLMLDVFTEESGRVRLVAKGARSKRSTLKGALQPFTPLLLRFGGRGEVKTLRSAEAVSLALPLS
Query Conservation      



    
 
 
 

 


 
 
 
   


 

 

     
 

            
  
  

       
 
Alig confidence 

























.










..







































Template Conservation    
 



    
 
 
 

 
 
  .
 
   


 
..


      
                            
 
Template Sequence  ANRSGIVIRRRVTPAGDIIVTLLTPQ. GKLKAIARGGV. . KGPLSSSLNLFHHVGVQVYQGPHDLASVKQAVLEGALPTL
Template Known Secondary structure 
TTS
TT.TT
T..TSTTTTTS
TT








GGG
Template Predicted Secondary structure 







.



..















Template SS confidence 















































































   6...10.........20.........30. ........40.. .......50.........60.........70.........80..
 
   83. .....90.........100.........110.........120.........130.........140.........150.........160
Predicted Secondary structure  ..


























Query SS confidence 

. .











































































Query Sequence  GI. . TLYSGLYINELLSRVLEYETRFSELFFDYLHCIQSLAGVTGTPEPALRRFELALLGHLGYGVNFTHCAGSGEPVDD
Query Conservation   
..    
 

 


     
      

 

   
  
          
  


 

  

  
 
  
  

  
  
Alig confidence 

..








































.

































Template Conservation   
      
    


     
      

 

   
  
     .       
 



   
  
 
  
  

     
Template Sequence  AEPERYAFAHLMAEFADALFQEGEFSEQAFDLFAASLRGVAHQPD. PEWVALVMSYKLLGLAGVIPQTARCARCGAPDPE
Template Known Secondary structure  GSS
TT


SS
.TTSSS



SB
TTT

BS

Template Predicted Secondary structure 












.


















Template SS confidence 















































































   84.....90.........100.........110.........120........ .130.........140.........150.........160..
 
   161........170........ .180.........190.........200... ......210.........220.........
Predicted Secondary structure 








.











..........





Query SS confidence 

















.
























. . . . . . . . . .

























Query Sequence  TMTYRYREEKGFIASVVI. DNKTFTGRQLKALNAREFPDADTLR. . . . . . . . . . AAKRFTRMALKPYLGGKPLKSRELFR
Query Conservation       
    
       .         
  
            ..........    

   
   

 





  
 
Alig confidence  ....













.
























..........














.....





Template Conservation  ....      

 

  
             
  
                   

  

  
   


.....      
Template Sequence  . . . . HPDPLGGQLLCSKCAALPPYPPAVLDFLRHAVRRTVRASFEQPVPSADRPALWRALEKFVTVQVG. . . . . GVHSWR
Template Known Secondary structure  ....
TTTSS
TTT
SS



TTTS
S


GGGS
.....S

GGG
Template Predicted Secondary structure  ....






















.....
Template SS confidence 















































































   163......170.........180.........190.........200.........210.........220....... ..230...
 
   230...
Predicted Secondary structure 
Query SS confidence 



Query Sequence  QFMP
Query Conservation 
 
 
Alig confidence 



Template Conservation 

  
Template Sequence  QLVP
Template Known Secondary structure  GGS
Template Predicted Secondary structure 
Template SS confidence 



   234...
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions