Job Description P0ABT8 Confidence 2.13% Date Thu Jan 5 11:16:21 GMT 2012 Rank 44 Aligned Residues 208 % Identity 11% Template d1xioa_ SCOP info Family A G protein-coupled receptor-like Family A G protein-coupled receptor-like Bacteriorhodopsin-like Resolution 2.00

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		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	G	A	F	D	F	T	A	L	R	C	I	F	G	A	L	V	L	F	I	V	L	L	L	R	G	R	G	M	R	P	T	P	F	K	Y	T	L	A	I	A	L	L	Q	T	C	G	M	V	G	L	A	Q	W	A	L	V	S	G	G	A	G	K	V	A	I	L	S	Y	T	M	P	F	W	V	V	I	F	A	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	N	L	E	S	L	L	H	W	I	Y	V	A	G	M	T	I	G	A	L	H	F	W	S	L	S	R	N	P	R	G	V	P	Q	Y	E	Y	L	V	A	M	F	I	P	I	W	S	G	L	A	Y	M	A	M	A	I	D	I	A	H	Y	A	R	Y	I	D	W	M	V	T	T	P	L	L	L	L	S	L	S	W
Template Known Secondary structure																												T	S		T	T																												T	T
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		116	.	.	.	120	.	.	.	.	.	.	.	.							.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
Predicted Secondary structure															.	.	.	.	.	.
Query SS confidence															.	.	.	.	.	.
Query Sequence		L	F	L	G	E	R	L	R	R	G	Q	Y	F	.	.	.	.	.	.	A	I	L	I	A	A	F	G	L	F	L	V	L	Q	P	W	Q	L	D	F	S	S	M	K	S	A	M	L	A	I	L	S	G	V	S	W	G	A	S	A	I	V	A	K	R	L	Y	A	R	H	P	R	V	D	L	L	S	L	T	S	W
Query Conservation															.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.
Template Conservation
Template Sequence		T	A	M	Q	F	I	K	K	D	W	T	L	I	G	F	L	M	S	T	Q	I	V	V	I	T	S	G	L	I	A	D	L	S	E	R	D	W	V	R	Y	L	W	Y	I	C	G	V	C	A	F	L	I	I	L	W	G	I	W	N	P	L	R	A	K	T	R	T	Q	S	S	E	L	A	N	L	Y	D	K	L	V
Template Known Secondary structure				T	T	T	S																												S	S																								T							T	T	S
Template Predicted Secondary structure
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.			.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure																	.	.
Query SS confidence																	.	.
Query Sequence		Q	M	L	Y	A	A	L	V	M	S	V	V	A	L	L	.	.	V	P	Q	R	E	I	D	W	Q	P	T	V	F	W	A	L	A	Y	S	A	I	L	A	T	A	L	A	W	S	L	W	L	F	V	L	K	N	L	P
Query Conservation																	.	.
Alig confidence																	.	.
Template Conservation
Template Sequence		T	Y	F	T	V	L	W	I	G	Y	P	I	V	W	I	I	G	P	S	G	F	G	W	I	N	Q	T	I	D	T	F	L	F	C	L	L	P	F	F	S	K	V	G	F	S	F	L	D	L	H	G	L	R	N	L	N
Template Known Secondary structure																		S	T	T	T	T		S	S																															T	T
Template Predicted Secondary structure
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions