Job Description P0ABT8 Confidence 9.57% Date Thu Jan 5 11:16:21 GMT 2012 Rank 8 Aligned Residues 232 % Identity 8% Template d1u7ga_ SCOP info Ammonium transporter Ammonium transporter Ammonium transporter Resolution 1.40

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		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60				.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure																																																				.	.	.
Query SS confidence																																																				.	.	.
Query Sequence		A	I	S	G	L	V	V	L	T	L	I	W	S	Y	S	W	I	F	M	K	Q	V	T	S	Y	I	G	A	F	D	F	T	A	L	R	C	I	F	G	A	L	V	L	F	I	V	L	L	L	R	.	.	.	G	R	G	M	R	P	T	P	F	K	Y	T	L	A	I	A	L	L	Q	T	C	G	M	V	G	L	A
Query Conservation																																																				.	.	.
Alig confidence															.																																					.	.	.
Template Conservation															.
Template Sequence		T	L	S	Y	I	P	I	A	H	X	V	W	G	.	G	G	L	L	A	S	H	G	A	L	D	F	A	G	G	T	V	V	H	I	N	A	A	I	A	G	L	V	G	A	Y	L	I	G	K	R	V	G	F	G	K	E	A	F	K	P	H	N	L	P	X	V	F	T	G	T	A	I	L	Y	I	G	W	F	G	F
Template Known Secondary structure				T										S	.	S							T				S	S		T	T	T	T															S						T	T		S	S			G	G	G
Template Predicted Secondary structure															.
Template SS confidence
		137	.	.	140	.	.	.	.	.	.	.	.	.		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
		88	.		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.			.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure				.																	.	.
Query SS confidence				.																	.	.
Query Sequence		Q	W	.	A	L	V	S	G	G	A	G	K	V	A	I	L	S	Y	T	.	.	M	P	F	W	V	V	I	F	A	A	L	F	L	G	E	R	L	R	R	G	Q	Y	F	A	I	L	I	A	A	F	G	L	F	L	V	L	Q	P	W	Q	L	D	F	S	S	M	K	S	A	M	L	A	I	L	S	G	V	S	W
Query Conservation				.																	.	.
Alig confidence				.																	.	.
Template Conservation
Template Sequence		N	A	G	S	A	G	T	A	N	E	I	A	A	L	A	F	V	N	T	V	V	A	T	A	A	A	I	L	G	W	I	F	G	E	W	A	L	R	G	L	P	S	L	L	G	A	C	S	G	A	I	A	G	L	V	G	V	T	P	A	C	G	Y	I	G	V	G	G	A	L	I	I	G	V	V	A	G	L	A	G
Template Known Secondary structure				G	G	G	S	S	S	S																														S	S																		T	T	T	T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.								.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure																																																			.	.	.	.	.	.	.
Query SS confidence																																																			.	.	.	.	.	.	.
Query Sequence		G	A	S	A	I	V	A	K	R	L	Y	A	R	H	P	R	V	D	L	L	S	L	T	S	W	Q	M	L	Y	A	A	L	V	M	S	V	V	A	L	L	V	P	Q	R	E	I	D	W	Q	.	.	.	.	.	.	.	P	T	V	F	W	A	L	A	Y	S	A	I	L	A	T	A	L	A	W	S	L	W	L	F
Query Conservation																																																			.	.	.	.	.	.	.
Alig confidence																																																			.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	W	G	V	T	X	L	K	R	L	L	R	V	D	D	P	C	D	V	F	G	V	H	G	V	C	G	I	V	G	C	I	X	T	G	I	F	A	A	S	S	L	G	G	V	G	F	A	E	G	V	T	X	G	H	Q	L	L	V	Q	L	E	S	I	A	I	T	I	V	W	S	G	V	V	A	F	I	G	Y	K
Template Known Secondary structure														S			G	G	G																				T	S	G	G	G	T						T	T
Template Predicted Secondary structure
Template SS confidence
		296	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.
		238	.	240	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	K	N	L	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	A	D	L	T	V
Template Known Secondary structure							T
Template Predicted Secondary structure
Template SS confidence
		376	.	.	.	380	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions