Job Description P0ABT8 Confidence 2.52% Date Thu Jan 5 11:16:21 GMT 2012 Rank 19 Aligned Residues 95 % Identity 17% Template d1iwga7 SCOP info Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain Resolution 3.50

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		206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
Predicted Secondary structure																																																																																.	.
Query SS confidence																																																																																.	.
Query Sequence		P	Q	R	E	I	D	W	Q	P	T	V	F	W	A	L	A	Y	S	A	I	L	A	T	A	L	A	W	S	L	W	L	F	V	L	K	N	L	P	A	S	I	A	S	L	S	T	L	A	V	P	V	C	G	V	L	F	S	W	W	L	L	G	E	N	P	G	A	V	E	G	S	G	I	V	L	I	V	L	.	.
Query Conservation																																																																																.	.
Alig confidence																																																																																.	.
Template Conservation
Template Sequence		A	Q	Y	P	T	P	F	V	K	I	S	I	H	E	V	V	K	T	L	V	E	A	I	I	L	V	F	L	V	M	Y	L	F	L	Q	N	F	R	A	T	L	I	P	T	I	A	V	P	V	V	L	L	G	T	F	A	V	L	A	A	F	G	F	S	I	N	T	L	T	M	F	G	M	V	L	A	I	G	L	L
Template Known Secondary structure			S	S																													T	T				T	T	T	T	T																			T	T	T			S
Template Predicted Secondary structure
Template SS confidence
		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
					284	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
Predicted Secondary structure		.	.	.
Query SS confidence		.	.	.
Query Sequence		.	.	.	A	L	A	L	V	S	R	K	K	K	E	A	V	S	V	K	R
Query Conservation		.	.	.
Alig confidence		.	.	.
Template Conservation
Template Sequence		V	D	D	A	I	V	V	V	E	N	V	E	R	V	M	A	E	E	G	L
Template Known Secondary structure																			T	S
Template Predicted Secondary structure
Template SS confidence
		406	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions