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Job DescriptionP77252
Confidence92.05%DateThu Jan 5 12:26:51 GMT 2012
Rank2Aligned Residues168
% Identity14%Templatec3ojcD_
PDB info PDB header:isomeraseChain: D: PDB Molecule:putative aspartate/glutamate racemase; PDBTitle: crystal structure of a putative asp/glu racemase from yersinia pestis
Resolution1.75 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  AINSGYIKEAIPGMKNLIAALED. NDDPIISPAGSCTYAVKSYPTYLADEPEWASRAAKVAARMQDLTSFIVNKLGVVDV
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Template Sequence  LQAKGDWQTAAQLLSNAAISLKHAGAEVIVVCTNTXHKVADDIEA. . . . . . . . . . . . . ACGLPLLHIADATAVQIKQQGI
Template Known Secondary structure  TT
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SSSGGGGG.............TS
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TT
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Query Sequence  GASLQGRAVYHPSCSLARKLGVKDEPLTLLKNVRGLELLTFAEQDTCCGFGGTFSV. . . . KMAEISGEMVKEKVAHLMEV
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Template Sequence  D. . . . . KIGLLGT. RYTXEQGFYRG. . RLTEKH. GIEVITPDDTDREAVNRIIYEELCLGIISETSRDAYRRVIKKLEAQ
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Query Sequence  RPEYLIGADVSCLLNISGRLQREGQKVKVMHIAEVLMSR
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Template Sequence  GVQGIIFGC. . . . TEITLLVNAQDASVPVFDTTAIHASA
Template Known Secondary structure  T
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   190........ .200.........210.........220....
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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