Job Description P77252 Confidence 90.11% Date Thu Jan 5 12:26:51 GMT 2012 Rank 4 Aligned Residues 169 % Identity 18% Template c2dx7B_ PDB info PDB header:isomerase Chain: B: PDB Molecule:aspartate racemase; PDBTitle: crystal structure of pyrococcus horikoshii ot3 aspartate racemase2 complex with citric acid Resolution 2.00 Å

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		44	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.		.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
Predicted Secondary structure																											.
Query SS confidence																											.
Query Sequence		Q	P	A	I	N	S	G	Y	I	K	E	A	I	P	G	M	K	N	L	I	A	A	L	E	D	.	N	D	D	P	I	I	S	P	A	G	S	C	T	Y	A	V	K	S	Y	P	T	Y	L	A	D	E	P	E	W	A	S	R	A	A	K	V	A	A	R	M	Q	D	L	T	S	F	I	V	N	K	L	G	V	V
Query Conservation																											.
Alig confidence																											.																						.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	T	A	Y	I	L	G	K	G	E	D	P	R	P	Q	L	I	W	T	A	K	R	L	E	E	C	G	A	D	F	I	I	M	P	A	N	T	A	H	A	F	V	E	D	I	R	K	.	.	.	.	.	.	.	.	.	.	.	.	.	A	I	K	I	P	I	I	S	M	I	E	E	T	A	K	K	V	K	E	L
Template Known Secondary structure								S	S																			T		S							S	G	G	G	G	G							.	.	.	.	.	.	.	.	.	.	.	.	.			S	S		B														T
Template Predicted Secondary structure																																																	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		48	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.														.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.				.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																.	.	.
Query SS confidence																																																.	.	.
Query Sequence		D	V	G	A	S	L	Q	G	R	A	V	Y	H	P	S	C	S	L	A	R	K	L	G	V	K	D	E	P	L	T	L	L	K	N	V	R	G	L	E	L	L	T	F	A	E	Q	.	.	.	D	T	C	C	G	F	G	G	T	F	S	V	K	M	A	E	I	S	G	E	M	V	K	E	K	V	A	H	L	M	E
Query Conservation																																																.	.	.
Alig confidence				.	.	.	.	.														.	.	.	.												.											.	.	.
Template Conservation				.	.	.	.	.														.	.	.	.												.
Template Sequence		G	F	.	.	.	.	.	K	K	A	G	L	L	A	T	T	G	T	I	V	.	.	.	.	S	G	V	Y	E	K	E	F	S	K	Y	.	G	V	E	I	M	T	P	T	E	D	E	Q	K	D	V	M	R	G	I	Y	E	G	V	K	A	G	N	L	K	L	G	R	E	L	L	L	K	T	A	K	I	L	E	E
Template Known Secondary structure		T		.	.	.	.	.	S													.	.	.	.		T									T	.	T																								T	T
Template Predicted Secondary structure				.	.	.	.	.														.	.	.	.												.
Template SS confidence
		115	.						.	.	.	120	.	.	.	.	.	.	.	.	.					130	.	.	.	.	.	.	.	.	.	140		.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	R	P	E	Y	L	I	G	A	D	V	S	C	L	L	N	I	S	G	R	L	Q	R	E	G	Q	K	V	K	V	M	H	I	A	E	V	L	M	S	R
Query Conservation
Alig confidence													.	.	.	.
Template Conservation													.	.	.	.
Template Sequence		R	G	A	E	C	I	I	A	G	C	T	.	.	.	.	E	V	S	V	V	L	K	Q	D	D	L	K	V	P	L	I	D	P	M	D	V	I	A	E	V
Template Known Secondary structure		T	T		S	S					S		.	.	.	.								G	G	G		S	S
Template Predicted Secondary structure													.	.	.	.
Template SS confidence
		185	.	.	.	.	190	.	.	.	.	.					.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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