 |
Job Description | P0CB39 | Confidence | 9.05% | Date | Thu Jan 5 11:30:09 GMT 2012 |
Rank | 72 | Aligned Residues | 54 |
% Identity | 19% | Template | d1uzdc1 |
SCOP info | RuBisCO, small subunit
| RuBisCO, small subunit
| RuBisCO, small subunit
|
Resolution | 2.4 |
|
  |   |
436 | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
N | D | H | V | V | A | S | L | I | K | D | F | K | A | A | N | P | N | G | F | L | V | Y | F | S | D | H | G | E | E | V | Y | D | T | P | P | H | K | T | Q | G | R | N | E | D | N | P | T | R | H | M | Y | T | I | P | F | L |
Query Conservation |   |
  |
|   |   |
|   |   |
|
|   |   |
|   |   |   |   |   |   |
|
|
|
|   |   |
|
|
|
|   |   |   |   |
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |
|
|   |
|
|
|   |
|
|
|   |   |
|
|   |
|
|
|
|
|   |   |   |   |
|   |   |   |   |
|   |   |   |   |   |   |
| . | . | . |
|
|   |
|
|
|
|
|
|
|
|
|
|
|
Template Sequence |   |
T | D | E | Q | I | A | A | Q | V | D | Y | I | V | A | N | G | W | I | P | C | L | E | F | A | T | D | H | G | F | V | Y | R | E | H | H | N | S | P | G | Y | . |
. |
. |
Y | D | G | R | Y | W | T | M | W | K | L | P | M | F |
Template Known Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|  |  |  |  |  |  |  | S | S |
|
| S |
| B |
| S | S |
|
| S | T | T |
| . | . | . |
| B | S |
|
|
|  |  |  | S |
|
|
| T |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
22 | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | |
|
|
. | . | . | . | . | . | . | . | 70 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|