Job Description P0CB39 Confidence 100.00% Date Thu Jan 5 11:30:09 GMT 2012 Rank 4 Aligned Residues 330 % Identity 16% Template c3ed4A_ PDB info PDB header:transferase Chain: A: PDB Molecule:arylsulfatase; PDBTitle: crystal structure of putative arylsulfatase from escherichia coli Resolution 1.70 Å

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		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
Predicted Secondary structure																																																																							.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																							.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	R	T	L	V	L	V	I	G	E	S	T	Q	R	G	R	M	S	L	Y	G	Y	P	R	E	T	T	P	E	L	D	A	L	H	K	T	D	P	N	L	T	V	F	N	N	V	V	T	S	R	P	Y	T	I	E	I	L	Q	Q	A	L	T	F	A	N	E	K	N	P	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																							.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																							.	.	.																														.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																							.	.	.
Template Sequence		Q	P	N	L	V	I	I	M	A	D	D	L	G	Y	G	D	L	A	T	Y	G	H	Q	I	V	K	T	P	N	I	D	R	L	A	Q	E	G	.	.	.	V	K	F	T	D	Y	Y	A	P	A	P	L	S	S	P	S	R	A	G	L	L	T	G	R	M	P	F	R	T	G	I	R	S	W	I	P	S	G	K	D
Template Known Secondary structure											S	S			T	T	S	S	G	G	G	T		S	S												T	S	.	.	.				S	S				S	S	S	S											T	S		G	G	G	G	T		S	S				T	T	S	S
Template Predicted Secondary structure																																							.	.	.
Template SS confidence
		42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.				.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
			305	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	D	L	Y	L	T	Q	P	S	L	M	N	M	M	K	Q	A	G	Y	K	T	F	W	I	T	N	Q	Q	T	M	T	A	R	N	T	M	L	T	V	F	S	R	Q	T	D	K	Q	Y	Y	M	N	Q	Q	R	T	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation		.																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	A	L	G	R	N	E	L	T	I	A	N	L	L	K	A	Q	G	Y	D	T	A	M	M	G	K	L	H	L	N	A	G	G	D	R	T	D	Q	P	Q	A	Q	D	M	G	F	D	Y	S	L	A	N	T	A	G	F	V	T	D	A	T	L	D	N	A	K	E	R	P	R	Y	G	M	V	Y	P	T	G	W	L
Template Known Secondary structure				S		T	T										T	T	T											S	S	S		T	T		T	T	S			T	T	T	T	T		S							S	S	S								T			S	S	S		B							S
Template Predicted Secondary structure
Template SS confidence
		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
										360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.			.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.										.	.	.	.	.	.	.	420
Predicted Secondary structure		.	.	.	.	.	.	.	.																				.	.																																			.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.																				.	.																																			.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	S	A	R	E	Y	D	T	N	V	L	K	P	F	Q	E	V	L	N	D	.	.	P	A	P	K	K	L	I	I	V	H	L	L	G	T	H	I	K	Y	K	Y	R	Y	P	E	N	Q	G	K	F	D	G	N	T	D	.	.	.	.	.	.	.	.	.	H	V	P	P	G	L	N	A
Query Conservation		.	.	.	.	.	.	.	.																				.	.																																			.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.																				.	.																					.	.													.	.	.	.	.	.	.	.	.
Template Conservation																																																			.	.
Template Sequence		R	N	G	Q	P	T	P	R	A	D	K	M	S	G	E	Y	V	S	S	E	V	V	N	W	L	D	N	K	K	D	S	K	P	F	F	L	Y	V	A	F	T	E	V	H	S	P	L	A	S	.	.	P	K	K	Y	L	D	M	Y	S	Q	Y	M	S	A	Y	Q	K	Q	H	P	D	L	F	Y	G	D	W	A	D
Template Known Secondary structure			T	T							S	S																T			S	S											T	T	S	S	S				.	.							T	T	G	G	G	B							S	T	T	B		G	G	G		T	T
Template Predicted Secondary structure																																																			.	.
Template SS confidence
		199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.			.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
		421	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.			.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.											.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.
Predicted Secondary structure																																	.	.																						.	.	.	.	.	.	.	.	.	.
Query SS confidence																																	.	.																						.	.	.	.	.	.	.	.	.	.
Query Sequence		E	E	L	E	S	Y	N	D	Y	D	N	A	N	L	Y	N	D	H	V	V	A	S	L	I	K	D	F	K	A	A	N	.	.	P	N	G	F	L	V	Y	F	S	D	H	G	E	E	V	Y	D	T	P	P	H	.	.	.	.	.	.	.	.	.	.	K	T	Q	G	R	N	E	D	N	P	T	R	H	M	Y	T
Query Conservation																																	.	.																						.	.	.	.	.	.	.	.	.	.
Alig confidence																																	.	.																						.	.	.	.	.	.	.	.	.	.						.
Template Conservation																																																																							.
Template Sequence		K	P	W	R	G	V	G	E	Y	Y	A	N	I	S	Y	L	D	A	Q	V	G	K	V	L	D	K	I	K	A	M	G	E	E	D	N	T	I	V	I	F	T	S	D	N	G	P	V	T	R	E	A	R	K	V	Y	E	L	N	L	A	G	E	T	D	G	L	R	G	R	.	K	D	N	L	W	E	G	G	I	R
Template Known Secondary structure		S				B	S																								T	T		G	G	G								S	S					S				S	G	G	G	T	T						T	T		S			.	T	T			S					B
Template Predicted Secondary structure																																																																							.
Template SS confidence
		277	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.		.	.	.	.	350	.	.	.	.	.
		489	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.			.	.	.	.	.	.	540	.	.					.	.	.	.	.	.	.	550	.	.	.	.								.
Predicted Secondary structure																																															.	.										.	.	.	.													.	.	.	.	.	.	.
Query SS confidence																																															.	.										.	.	.	.													.	.	.	.	.	.	.
Query Sequence		I	P	F	L	L	W	T	S	E	K	W	Q	A	T	H	P	R	D	F	S	Q	D	V	D	R	K	Y	S	L	A	E	L	I	H	T	W	S	D	L	A	G	L	S	Y	D	.	.	G	Y	D	P	T	R	S	V	V	.	.	.	.	N	P	Q	F	K	E	T	T	R	W	I	G	.	.	.	.	.	.	.	N
Query Conservation																																															.	.										.	.	.	.													.	.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.																											.	.										.	.	.	.													.	.	.	.	.	.	.
Template Conservation															.	.	.	.	.	.
Template Sequence		V	P	A	I	I	K	Y	G	K	H	L	P	Q	.	.	.	.	.	.	G	M	V	S	D	T	P	V	Y	G	L	D	W	M	P	T	L	A	K	M	M	N	F	K	L	P	T	D	R	T	F	D	G	E	S	L	V	P	V	L	E	Q	K	A	L	K	R	E	K	P	L	I	F	G	I	D	M	P	F	Q	D
Template Known Secondary structure									T	T	S	S		T	.	.	.	.	.	.	T					S				G	G	G										T					S	S	S												T	T						S	S										S		S
Template Predicted Secondary structure															.	.	.	.	.	.
Template SS confidence
		356	.	.	.	360	.	.	.	.	.	.	.	.							.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.
		556	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	Y	K	K	N	A	L	I	D	Y	D	T	L	P	Y	G	D	Q	V	G	N	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	P	T	D	E	W	A	I	R	D	G	D	W	K	M	I	I	D	R	N	N	K
Template Known Secondary structure		S										T	T							T	T	S
Template Predicted Secondary structure
Template SS confidence
		430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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