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Job DescriptionP0CB39
Confidence98.52%DateThu Jan 5 11:30:09 GMT 2012
Rank34Aligned Residues244
% Identity16%Templatec3a52A_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:cold-active alkaline phosphatase; PDBTitle: crystal structure of cold-active alkailne phosphatase from2 psychrophile shewanella sp.
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   238.240.........250.... .....260.........270.........280.........290.........300.......
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Query Sequence  TLVLVIGESTQRGRMSL. . . . . . . YGYPRETTPELDALHKTDPNLTVFNNVVTSRPYTIEILQQALTFANEKNPDLY. . .
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Template Sequence  GMIIMVGDGMGPAYTSAYRYFQDNPDTEEIEQTVFDRLL. VGMASTYPARESGYVTDSAASATALATGFKSYNGAIAVDI
Template Known Secondary structure  TT



TTSSS



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GGG
S


S



TT
BSB
T
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   2.......10.........20.........30.........40 .........50.........60.........70.........80
 
   308.310.........320.........330 .........340......
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Query Sequence  . . LTQPSLMNMMKQAGYKTFWITNQ. . . . . . . . . . QTMTARNTMLTVFSRQ. . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  NKRPLTTIMQMAKARGMSTGVAVTAQVNHATPAAFLTHNESRKNYEAIAADMLKSDADVILGGGRKYFSEALVSQFSAKG
Template Known Secondary structure  T

B


TT
TTS

BS
TT
T
S
GGG

TT
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   81........90.........100.........110.........120.........130.........140.........150.........160
 
   347..350.........360.........370.........380......... 390.........400..
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Query Sequence  . . . . . . . . . . . . . . . . . . . . TDKQYYMNQQRTQSAREYDTNVLKPFQEVLNDPAPKKLIIVHL. . . . LGTHIKYKYRYPE
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Template Sequence  YQHITELAQLDSITQPKVLGLFAEVQLPWVIDDTDANTLSKLTQKSLDLLSQNEKGFVLLVEGSLIDWAGHNND. . . . . .
Template Known Secondary structure 

SGGGGGG

SS

SSSS


GGGSS
S
TT
TT
TTT
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   161........170.........180.........190.........200.........210.........220.........230....
 
   403......410.........420.........430.........440.........450.........460.. .......470......
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Query Sequence  NQGKFDGNTDHVPPGLNAEELESYNDYDNANLYNDHVVASLIKDFKAANPNGFLVYFSDH. . . GEEVYDTPPHKTQG. . .
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . IATAMAEMQGFANAIEVVEQYIRQHP. DTLLVVTADHNTGGLSIGANGEYQWDTKLP
Template Known Secondary structure  .......................

.S
S
TT
SBTTB




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   235....240.........250.........260 .........270.........280.........290
 
   477..480.....
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . RNEDNPTRH
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Template Sequence  KGISASPASIATHAIAADDWQAGVNQQLGFDVNSTELQQLTNARMQGKSTLEVALKKIIDTRSYTGWTTSGHTGVD. . . .
Template Known Secondary structure  T

S

SS
TS



T
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   291........300.........310.........320.........330.........340.........350.........360......
 
   486...490.........500.........510.........520.........
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Query Sequence  MYTIPFLLWTSEKWQATHPRDFSQDVDRKYSLAELIHTWSDLAG
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Template Sequence  . . . VQVFAMGPA. . . . . . . . . . ADLFKGNQDNTHIAEKMMSLLP
Template Known Secondary structure  ...STT..........GGGG
TS
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   367..370..... ....380.........390.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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