Job Description P0CB39 Confidence 100.00% Date Thu Jan 5 11:30:09 GMT 2012 Rank 1 Aligned Residues 348 % Identity 15% Template c2w8dB_ PDB info PDB header:transferase Chain: B: PDB Molecule:processed glycerol phosphate lipoteichoic acid synthase 2; PDBTitle: distinct and essential morphogenic functions for wall- and2 lipo-teichoic acids in bacillus subtilis Resolution 2.35 Å

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		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.		.	.
Predicted Secondary structure																																																																															.
Query SS confidence																																																																															.
Query Sequence		Q	L	N	S	L	T	K	L	L	N	E	N	N	A	L	P	P	L	A	N	F	K	D	E	S	G	N	E	P	R	T	L	V	L	V	I	G	E	S	T	Q	R	G	R	M	S	L	Y	G	Y	P	R	E	T	T	P	E	L	D	A	L	H	K	T	D	P	N	L	T	V	F	N	N	V	V	T	S	.	R	P
Query Conservation																																																																															.
Alig confidence																																																																			.												.
Template Conservation																																																																			.
Template Sequence		D	S	S	D	V	T	E	V	E	N	Y	X	K	A	N	Y	D	V	P	N	N	V	Y	F	G	K	A	E	G	K	N	V	I	Y	V	S	L	E	S	L	Q	S	F	I	I	D	Y	K	I	D	G	K	E	V	T	P	F	L	N	K	L	A	H	D	N	.	E	T	F	Y	F	D	N	F	F	H	Q	T	G	Q
Template Known Secondary structure			G	G	G											T						T	T	T	T	T	T	T	T	T									T	T			G	G	G	T	T				T	T			S	S									S	S	.	S	S				S	S							T
Template Predicted Secondary structure																																																																			.
Template SS confidence
		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280		.	.	.	.	.	.	.	.	.	290	.	.	.	.
		287	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.							.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.		.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.				.	350	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.																										.																	.	.	.
Query SS confidence																							.	.	.	.	.	.																										.																	.	.	.
Query Sequence		Y	T	I	E	I	L	Q	Q	A	L	T	F	A	N	E	K	N	P	D	L	Y	.	.	.	.	.	.	L	T	Q	P	S	L	M	N	M	M	K	Q	A	G	Y	K	T	F	W	I	T	N	Q	Q	T	.	M	T	A	R	N	T	M	L	T	V	F	S	R	Q	T	D	.	.	.	K	Q	Y	Y	M	N	Q	Q
Query Conservation																							.	.	.	.	.	.																										.																	.	.	.
Alig confidence																							.	.	.	.	.	.																										.																	.	.	.
Template Conservation
Template Sequence		G	K	S	D	A	E	F	X	X	E	N	S	L	Y	P	L	A	Q	G	S	V	F	V	N	K	A	Q	N	T	L	Q	S	V	P	A	I	L	K	S	K	N	Y	T	S	A	T	F	H	G	N	T	Q	T	F	W	N	R	N	E	X	Y	K	A	E	G	I	D	K	F	F	D	S	A	Y	Y	D	X	N	E	E
Template Known Secondary structure		T																S	S	S							T	T	S									G	G	G	G	T								S	S		T	T	G	G	G									T							G	G	G	S				T	T
Template Predicted Secondary structure
Template SS confidence
		295	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.
		357	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	T	Q	S	A	R	E	Y	D	T	N	V	L	K	P	F	Q	E	V	L	N	D	P	A	P	K	K	L	I	I	V	H	L	L	G	T	H	I	K	Y	K	Y	R	Y	P	E	N	Q	G	K	F	D	G	N	T	D	H	V	P	P	G	L	N	A	E	E	L	E	S	Y	N	D	Y	D	N	A	N	L	Y	N
Query Conservation
Alig confidence																																												.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																												.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	T	K	N	Y	G	X	K	D	K	P	F	F	K	E	S	X	P	L	L	E	S	L	P	Q	P	F	Y	T	K	F	I	T	L	S	N	H	F	P	F	G	X	.	.	.	.	.	.	.	.	.	.	.	D	E	G	D	T	D	F	P	A	G	D	F	G	D	S	V	V	D	N	Y	F	Q	S	A	H	Y	L
Template Known Secondary structure		T	B		S	S	S	B															T	S		S	S									S	S		T	T				.	.	.	.	.	.	.	.	.	.	.		B	T	T	B							S	S
Template Predicted Secondary structure																																												.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		376	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.												.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.
		437	.	.	440	.	.	.	.	.	.	.	.	.	450	.			.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.					470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510
Predicted Secondary structure																	.	.																			.	.	.	.
Query SS confidence																	.	.																			.	.	.	.
Query Sequence		D	H	V	V	A	S	L	I	K	D	F	K	A	A	N	.	.	P	N	G	F	L	V	Y	F	S	D	H	G	E	E	V	Y	D	T	.	.	.	.	P	P	H	K	T	Q	G	R	N	E	D	N	P	T	R	H	M	Y	T	I	P	F	L	L	W	T	S	E	K	W	Q	A	T	H	P	R	D	F	S	Q	D
Query Conservation																	.	.																			.	.	.	.
Alig confidence																	.	.																			.	.	.	.																												.	.	.	.	.	.	.	.
Template Conservation																																																																				.	.	.	.	.	.	.	.
Template Sequence		D	Q	S	I	E	Q	F	F	N	D	L	K	K	D	G	L	Y	D	K	S	I	I	V	X	Y	G	D	H	Y	G	I	S	E	N	H	N	K	A	X	A	K	V	L	G	K	D	E	I	T	D	Y	D	N	A	Q	L	Q	R	V	P	L	F	I	H	A	A	.	.	.	.	.	.	.	.	G	V	K	G	E	K
Template Known Secondary structure															T	S		G	G	G									S		S	S		G	G	G								T	T	S	S										T	T	B								T	.	.	.	.	.	.	.	.	T	S
Template Predicted Secondary structure																																																																				.	.	.	.	.	.	.	.
Template SS confidence
		445	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510									.	.	.	.	.	.
		511	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.		.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.
Predicted Secondary structure																												.
Query SS confidence																												.
Query Sequence		V	D	R	K	Y	S	L	A	E	L	I	H	T	W	S	D	L	A	G	L	S	Y	D	G	Y	D	.	P	T	R	S	V	V	N	P	Q	F	K	E	T	T	R	W	I	G	N	P	Y	K	K	N	A	L	I	D	Y	D	T	L	P	Y	G	D	Q	V	G
Query Conservation																												.
Alig confidence																												.
Template Conservation
Template Sequence		V	H	K	Y	A	G	D	V	D	V	A	P	T	I	L	H	L	L	G	V	D	T	K	D	Y	L	X	S	G	S	D	I	L	S	K	E	H	R	E	V	I	P	F	R	N	G	D	F	I	S	P	K	Y	T	K	I	S	G	K	Y	Y	D	T	K	T	G
Template Known Secondary structure				S				G	G	G									T	T				T	T	S							T	T	S	T	T								T	T	S					S	S					T	T					T	T	T
Template Predicted Secondary structure
Template SS confidence
		517	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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