Job Description P0CB39 Confidence 99.12% Date Thu Jan 5 11:30:09 GMT 2012 Rank 26 Aligned Residues 257 % Identity 12% Template c2iucB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:alkaline phosphatase; PDBTitle: structure of alkaline phosphatase from the antarctic2 bacterium tab5 Resolution 1.95 Å

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		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.						.
Predicted Secondary structure																																																																												.	.	.	.	.
Query SS confidence																																																																												.	.	.	.	.
Query Sequence		N	E	P	R	T	L	V	L	V	I	G	E	S	T	Q	R	G	R	M	S	L	Y	G	Y	P	R	E	T	T	P	E	L	D	A	L	H	K	T	D	P	N	L	T	V	F	N	N	V	V	T	S	R	P	Y	T	I	E	I	L	Q	Q	A	L	T	F	A	N	E	K	N	P	D	L	Y	.	.	.	.	.	L
Query Conservation																																																																												.	.	.	.	.
Alig confidence																																										.	.																																	.	.	.	.	.
Template Conservation																																										.	.
Template Sequence		K	T	P	K	N	V	I	L	L	I	S	D	G	A	G	L	S	Q	I	S	S	T	F	Y	F	K	S	G	T	P	N	Y	T	Q	F	K	N	I	G	L	.	.	I	K	T	S	S	S	R	E	D	V	T	D	S	A	S	G	A	T	A	F	S	C	G	I	K	T	Y	N	A	A	I	G	V	A	D	D	S	T
Template Known Secondary structure					S								T	B								G	G	G	T	S	S	S	S			G	G	G	G							.	.						S	S		S	S													S					T	T		B	S	B		T	T	S
Template Predicted Secondary structure																																										.	.
Template SS confidence
		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.			.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
		309	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.																.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	Q	P	S	L	M	N	M	M	K	Q	A	G	Y	K	T	F	W	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	N	Q	Q	T	M	T	A	R	N	T	M	L	T	V	F	S	R	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	V	K	S	I	V	E	I	A	A	L	N	S	I	K	T	G	V	V	A	T	S	S	I	T	H	A	T	P	A	S	F	Y	A	H	A	L	N	R	G	L	E	E	E	I	A	M	D	M	T	E	S	D	L	D	F	F	A	G	G	G	L	N	Y	F	T	S	R	S	D	S	K	D	V	L	A	I	L	K	G
Template Known Secondary structure		B											T	T											T	T	S						T	T			B	S		T	T										T	T	S										T					S		T	T
Template Predicted Secondary structure
Template SS confidence
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
																									347	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	D	K	Q	Y	Y	M	N	Q	Q	R	T	Q	S	A	R	E	Y	D	T	N	V	L	K	P	F	Q	E	V	L	N	D	P	A	P	K	K	L	I	I	V	H	L	L	G	T	H	I	K	Y	K	Y	R	Y	P	E	N
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	Q	F	T	I	N	T	T	G	L	T	D	F	S	S	I	A	S	N	R	K	M	G	F	L	L	A	D	E	A	M	P	T	M	E	K	G	R	G	N	F	L	S	A	A	T	D	L	A	I	Q	F	L	S	K	D	N	S	A	F	F	I	M	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		T	T					S	S					S	T	T	T	T	T		S							S	S	S	S				T	T	T	T		T	T														T	G	G	G								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
		404	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.				.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.				.	.	.							.	.	.	.	470	.
Predicted Secondary structure																																	.	.	.																													.	.	.				.	.	.	.	.	.
Query SS confidence																																	.	.	.																													.	.	.				.	.	.	.	.	.
Query Sequence		Q	G	K	F	D	G	N	T	D	H	V	P	P	G	L	N	A	E	E	L	E	S	Y	N	D	Y	D	N	A	N	L	.	.	.	Y	N	D	H	V	V	A	S	L	I	K	D	F	K	A	A	N	P	N	G	F	L	V	Y	F	S	D	H	.	.	.	G	E	E	.	.	.	.	.	.	V	Y	D	T	P	P
Query Conservation																																	.	.	.																													.	.	.				.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.																		.											.	.	.				.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.																																								.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	E	G	S	Q	I	D	W	G	G	H	A	N	N	A	S	Y	L	I	S	E	I	N	D	F	D	D	A	I	G	T	A	L	A	F	A	K	S	D	G	.	N	T	L	V	I	V	T	S	D	H	E	T	G	G	F	T	L	A	A	K	S	N	K	S	E	Y	S	D
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.			T	T							T	T																											S	.	S								S				T	T		B
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.																																								.
Template SS confidence
														254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.		.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
		472	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	K	T	Q	G	R	N	E	D	N	P	T	R	H	M	Y	T	I	P	F	L	L	W	T	S	E	K	W	Q	A	T	H	P	R	D	F	S	Q	D	V	D	R	K	Y	S	L	A	E	L	I	H	T	W	S	D	L	A	G	L	S
Query Conservation
Alig confidence																												.	.	.	.	.	.	.	.	.	.
Template Conservation																												.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	T	E	I	G	P	T	F	S	T	G	G	H	S	A	T	L	I	P	V	F	A	Y	G	P	G	.	.	.	.	.	.	.	.	.	.	S	E	E	F	I	G	I	Y	E	N	N	E	I	F	H	K	I	L	K	V	T	K	W	N
Template Known Secondary structure								B		S		S	S												S	T	T	.	.	.	.	.	.	.	.	.	.	G	G	G	G						T	T											T
Template Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.
Template SS confidence
		325	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350											.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions