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Job DescriptionP31827
Confidence3.07%DateThu Jan 5 11:48:51 GMT 2012
Rank34Aligned Residues199
% Identity7%Templatec3sljA_
PDB info PDB header:protein transportChain: A: PDB Molecule:serine protease espp; PDBTitle: pre-cleavage structure of the autotransporter espp - n1023a mutant
Resolution2.48 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   545....550.........560.........570.........580.........590.........600.........610.........620....
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Query Sequence  YNDELAMGLQQKIGKNVIARANYVYREAHDQISKSSRTDSATKTTITEYNNDGKTKTHSFSLSFELAEPLHIRQVDINPQ
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Template Sequence  KSVGAGLYASAMFDSGAYIDLIGKYVHHDNEYTATFAGLGTR. . . . . . . . . . . . . . . . . . . . . . . . . . DYSTHSWYAGAE
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   1101........1110.........1120.........1130.........1140.. .......1150....
 
   625....630... ......640.........650.........660.........670.........680.........690.........700...
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Query Sequence  IVFSYIKSK. GNLSLNNGYEESNTGDNQVVYNGNLVSYDSVPVADFNNPLKISLNMDFTHQPSGLVWANTLAWQEARKAR
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Template Sequence  AGYRYHVTEDAWIEPQAELVYGSVSGKQFAWKDQGMHLSMKDKDYNPLIGRTGVDVGKSFSGKDWKVTARAGLGYQFDLL
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   1155....1160.........1170.........1180.........1190.........1200.........1210.........1220.........1230....
 
   704.....710.........720.........730.........740.........750.........760.........770.........780...
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Query Sequence  IILGKTNAQYISEYSDYKQYVDEKLDSSLTWDTRLSWTPQFLQQQNLTISADILNVLDSKTAVDTTNTGVATYASGRTFW
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Template Sequence  ANGETVLRDASGEKRIKGEK. . . . . DSRMLMSVGLNAEI. . . . RDNVRFGLEFEKSAFGKYNVDN. . . . . . . . . . . . AVN
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   1235....1240.........1250.... .....1260........ .1270.........1280.........1290 ...
 
   784.....790
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Query Sequence  LDVSMKF
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Template Sequence  ANFRYSF
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   1294.....1300
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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