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Job DescriptionP31827
Confidence100.00%DateThu Jan 5 11:48:51 GMT 2012
Rank7Aligned Residues657
% Identity11%Templatec3qlbA_
PDB info PDB header:metal transportChain: A: PDB Molecule:enantio-pyochelin receptor; PDBTitle: enantiopyochelin outer membrane tonb-dependent transporter from2 pseudomonas fluorescens bound to the ferri-enantiopyochelin
Resolution3.26 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   21........30......... 40.........50.........60.........70.........80.........90.....
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Query Sequence  DDKNMYMHFFEEMTVYAPV. . . . . PVPVNGNTHYTSESIERLPTGNGNISDLLRTNPAVRMDSTQSTSLNQGDIRPEKIS
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Template Sequence  SATGPQAGYVAKRSLSGTKTDASLSEIPQSISVITRDQMDAQ. . QVQSVNEALRYTAGVQANTTAASQRFD. . . . . . TLS
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SSS

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STTTSS
TTT
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SGGGSTT



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   25....30.........40.........50.........60...... ...70.........80.........90... ...
 
   96...100.........110.........120.........130.........140.........150.........160 .........170....
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Query Sequence  IHGASPYQNAYLIDGISATNNLNPANESDASSATNISGMSQGYYLDVSLLDNVTLYDSFVPVEFG. RFNGGVIDAKIKRF
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Template Sequence  IRGFDVT. TGMLRDGLKGNT. . . . . . . . . . . . . . . . . . AQAWPKVEAYGLERIDVLKGPASVLFGQNSPGGVVNQISKRP
Template Known Secondary structure  TT
G.GGTTB



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GGGS

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TT


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   97..100... ......110..... ....120.........130.........140.........150.......
 
   175....180 .........190.........200.........210.........220.........230.........240.........250...
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Query Sequence  NADDSK. VKLGYRTTRSDWLTSHIDENNKSAFNQGSSGSTYYSPDFKKNFYTLSFNQELADNFGVTAGLSRRQSDITRAD
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Template Sequence  LDKPFHEVQIQGGSFDRAQGQFDFSGPLDDEGQFLYRLVGLERDSGTQFDH. . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure 
SS
TTTSSSSSS
B
SSTT.............................
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   158.160.........170.........180.........190.........200........
 
   254.....260.........270.........280.........290.........300.........310.........320.........330...
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Query Sequence  YVSNDGIVAGRAQYKNVIDTALSKFTWFASDRFTHDLTLKYTGSSRDYNTSTFPQSDREMGNKSYGLAWDMDTQLAWAKL
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Template Sequence  . IKDDKQYFAPSFTWKPNDDTSLTLLADYTQDTFGAPRVFLPAQGTLLGNPNGKVRHNVFLDEPGLDNDRTQYSLGYLLE
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B

SSSS


SS


BSBTTTB

TT



TT


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SS

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   209210.........220.........230.........240.........250.........260.........270.........280.......
 
   334.....340.........350.........360.........370.........380.........390.........400.........410...
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Query Sequence  RTTVGWDHISDYTRHDHDIWYTELSCTYGDITGRCTRGGLGHISQAVDNYTFKTRLDWQKFAVGNVSHQPYFGAEYIYSD
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Template Sequence  HRLNDVWSLNSSARYGHVNLLTNTASGMSLAPDLRTLNRAAYRFRIVGDTYSLDNNAQARWNLGSTQMVSLLGIDYRRTR
Template Known Secondary structure 
SSS
TTTS

BSSS
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   288.290.........300.........310.........320.........330.........340.........350.........360.......
 
   414.....420.........430.........440.........450.........460. ........470.........480.........490..
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Query Sequence  AWTERHNQSESYVINAAGKKTNHTIYHKGKGRLGIDNYTLYMADRISW. RNVSLMPGVRYDYDNYLSNHNISPRFMTEWD
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Template Sequence  EDYYLRGGSASPIDIYNPVHHHHGVFDPSTPFTNTVQRADQVGVYAQQQFTFDEHWVLTVGGRQDRSSARTDNRMNDSGS
Template Known Secondary structure  SSS







B


STTTTTTT
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   368.370.........380.........390.........400.........410.........420.........430.........440.......
 
   493......500.........510.........520.........530.........540.........550.........560.. .......570.
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Query Sequence  IFANQTSMITAGYNRYYGGNILDMGLRDIRNSWTESVSGNKTLTRYQDLKTPYNDELAMGLQQKIGKNVI. ARANYVYRE
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Template Sequence  KQDDEKFTYRTGLVYLADNGLAPYISYST. . . . . SFDPVLGTNFYGTPYKPTSAKQSEVGVKYQPPGIDSYITLSLFDLT
Template Known Secondary structure 

TTS.....


SB
SSS
B




TTSS
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   451........460.........470......... 480.........490.........500.........510.........520.....
 
   572.......580.........590.........600.........610.........620.........630.........640.........650.
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Query Sequence  AHDQISKSSRTDSATKTTITEYNNDGKTKTHSFSLSFELAEPLHIRQVDINPQIVFSYIKSKGNLSLNNGYEESNTGDNQ
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Template Sequence  QENVLTTDPAQR. . . . . . . LNKIQTGEINVRGIELEGKASLAR. . . . . GLDLLAALTYNDAEVSKSNN. . . . . . . . . . . .
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SSST.......T

TT.....SSS

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   526...530....... ..540.........550.........560. ........570.........580.
 
   652.......660.........670.........680..... ....690.........700.........710.........720........
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Query Sequence  VVYNGNLVSYDSVPVADFNNPLKISLNMDFTHQP. . . SGLVWANTLAWQEARKARIILGKTNAQYISEYSDYKQYVDEKL
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Template Sequence  . . . . . . . . PLEKGKRPTDTPEKMASLWADYTLPEGPLSGLGFGAGVRYIGSTEADAA. . . . . . . . . . . . . . . . . . NTQRV
Template Known Secondary structure  ........TT





TT

S

SSTTTT


STT..................S

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   582.......590.........600.........610.........620.........630 .....
 
   729730.........740...... ...750.........760.........770.........780.........790
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Query Sequence  DSSLTWDTRLSWTPQFLQ. . QQNLTISADILNVLDSKTAVDTTNTGVATYASGRTFWLDVSMKF
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Template Sequence  PSYTLLDAAVHYDFDKLIPAAKGLRLAVNATNLTDKHYYEGCSLT. NCSAGYDRSVIASLRYRW
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GGGSSGGGTTSTT




SS.B




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   636...640.........650.........660.........670.........680 .........690........
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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