Return to main results Retrieve Phyre Job Id

Job DescriptionP31827
Confidence4.01%DateThu Jan 5 11:48:51 GMT 2012
Rank30Aligned Residues123
% Identity11%Templatec3a2rX_
PDB info PDB header:membrane proteinChain: X: PDB Molecule:outer membrane protein ii; PDBTitle: crystal structure of outer membrane protein porb from neisseria2 meningitidis
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   622.......630.........640.........650.........660.........670.........680.........690.........700.
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Query Sequence  NPQIVFSYIKSKGNLSLNNGYEESNTGDNQVVYNGNLVSYDSVPVADFNNPLKISLNMDFTHQPSGLVWANTLAWQEARK
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Template Sequence  VHRVVAGYDANDLYVSVAGQYEAAKNNEVGSIKGKKHEQT. . . . . . . . . . . . QVAATAAYRFGNVTPRVSYAHGFKAKVN
Template Known Secondary structure  TT
SSSTTTT
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BTT

T
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   219220.........230.........240.........250........ .260.........270.........280......
 
   702.......710.........720.........730.........740.........750.........760.........770.........780.
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Query Sequence  ARIILGKTNAQYISEYSDYKQYVDEKLDSSLTWDTRLSWTPQFLQQQNLTISADILNVLDSKTAVDTTNTGVATYASGRT
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Template Sequence  GVKDAN. . . . . . . . . . . . . . . . . . . . . YQYDQVIVGADYDF. . . . SKRTSALVSAGWLKQGKGAGKVEQTA. . . . . . . . .
Template Known Secondary structure  TGG.....................G
S....SSSSSTTS
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   287..290.. .......300...... ...310.........320.........330..
 
   782.......790
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Query Sequence  FWLDVSMKF
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Template Sequence  SMVGLRHKF
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   333......340.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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