Return to main results Retrieve Phyre Job Id

Job DescriptionP31827
Confidence1.70%DateThu Jan 5 11:48:51 GMT 2012
Rank77Aligned Residues201
% Identity9%Templatec2x27X_
PDB info PDB header:membrane proteinChain: X: PDB Molecule:outer membrane protein oprg; PDBTitle: crystal structure of the outer membrane protein oprg from2 pseudomonas aeruginosa
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   398.400.........410.........420.........430.........440.........450.........460.........470.......
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Query Sequence  NVSHQPYFGAEYIYSDAWTERHNQSESYVINAAGKKTNHTIYHKGKGRLGIDNYTLYMADRISWRNVSLMPGVRYDYDNY
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Template Sequence  AGDFIIRGGFATVDPDDSSSDIKLDGAKQRGTKATVDSDTQLGLTFTYMFADKWGVELVAATPFNHQVDVKGLLDGKLAD
Template Known Secondary structure  TT





TT
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   7..10.........20.........30.........40.........50.........60.........70.........80......
 
   478.480.........490.........500.........510.........520.........530.........540.........550.......
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Query Sequence  LSNHNISPRFMTEWDIFANQTSMITAGYNRYYGGNILDMGLRDIRNSWTESVSGNKTLTRYQDLKTPYNDELAMGLQQKI
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Template Sequence  IKQLPPTLLLQYYPMGGTNSAFQPYGGLGVNYTTFFDEDLASNRKAQGFSSMK. . . . . . . . . . LQDSWGLAGELGFDYML
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TTTTS

S
TT
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S
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   90.........100.........110.........120.........130.........140.. .......150.........
 
   558.560.........570.........580.........590.........600........
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Query Sequence  GKNVIARANYVYREAHDQISKSSRTDSATKTTITEYNNDGKTKTHSFSLSF
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Template Sequence  NEHALFNMAVWYMDIDTKASINGPSALGVNKTKVDVDVDPWVYMIGFGYKF
Template Known Secondary structure  SSS



TTTT
S

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   160.........170.........180.........190.........200.........210
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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