Job Description P31827 Confidence 4.52% Date Thu Jan 5 11:48:51 GMT 2012 Rank 27 Aligned Residues 100 % Identity 17% Template c2k0lA_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:outer membrane protein a; PDBTitle: nmr structure of the transmembrane domain of the outer2 membrane protein a from klebsiella pneumoniae in dhpc3 micelles. Resolution UNK

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		673	.	.	.	.	.	.	680	.	.	.	.		.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.
Predicted Secondary structure														.
Query SS confidence														.
Query Sequence		L	K	I	S	L	N	M	D	F	T	H	Q	.	P	S	G	L	V	W	A	N	T	L	A	W	Q	E	A	R	K	A	R	I	I	L	G	K	T	N	A	Q	Y	I	S	E	Y	S	D	Y	K	Q	Y	V	D	E	K	L	D	S	S	L	T	W	D	T	R	L	S	W	T	P	Q	F	L	Q	Q	Q	N	L	T
Query Conservation														.
Alig confidence														.																																			.	.	.	.	.	.	.	.	.																.	.	.	.
Template Conservation																																																	.	.	.	.	.	.	.	.	.																.	.	.	.
Template Sequence		Q	G	V	Q	L	T	A	K	L	G	Y	P	I	T	D	D	L	D	I	Y	T	R	L	G	G	M	V	W	R	A	D	S	K	G	N	Y	A	S	T	G	V	S	R	S	E	H	D	.	.	.	.	.	.	.	.	.	T	G	V	S	P	V	F	A	G	G	V	E	W	A	V	.	.	.	.	T	R	D	I	A
Template Known Secondary structure														S	S	S	S																			S				S	S	S							.	.	.	.	.	.	.	.	.																.	.	.	.	S	S	S
Template Predicted Secondary structure																																																	.	.	.	.	.	.	.	.	.																.	.	.	.
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.										.	140	.	.	.	.	.	.	.	.	.	150	.	.	.					.	.	.	.	.
		752	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790
Predicted Secondary structure
Query SS confidence
Query Sequence		I	S	A	D	I	L	N	V	L	D	S	K	T	A	V	D	T	T	N	T	G	V	A	T	Y	A	S	G	R	T	F	W	L	D	V	S	M	K	F
Query Conservation
Alig confidence																										.	.	.	.	.
Template Conservation																										.	.	.	.	.
Template Sequence		T	R	L	E	Y	Q	W	V	N	N	I	G	D	A	G	T	V	G	T	R	P	D	N	G	.	.	.	.	.	M	L	S	L	G	V	S	Y	R	F
Template Known Secondary structure							S	S		S	S					S					S	S		S		.	.	.	.	.
Template Predicted Secondary structure																										.	.	.	.	.
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.						.	.	.	.	.	.	.	190	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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