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Job Description | P31827 | Confidence | 4.52% | Date | Thu Jan 5 11:48:51 GMT 2012 |
Rank | 27 | Aligned Residues | 100 |
% Identity | 17% | Template | c2k0lA_ |
PDB info |
PDB header:membrane protein | Chain: A: PDB Molecule:outer membrane protein a; |
PDBTitle: nmr structure of the transmembrane domain of the outer2 membrane protein a from klebsiella pneumoniae in dhpc3 micelles.
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Resolution | UNK |
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673 | . | . | . | . | . | . | 680 | . | . | . | . | |
. | . | . | . | . | 690 | . | . | . | . | . | . | . | . | . | 700 | . | . | . | . | . | . | . | . | . | 710 | . | . | . | . | . | . | . | . | . | 720 | . | . | . | . | . | . | . | . | . | 730 | . | . | . | . | . | . | . | . | . | 740 | . | . | . | . | . | . | . | . | . | 750 | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
L | K | I | S | L | N | M | D | F | T | H | Q | . |
P | S | G | L | V | W | A | N | T | L | A | W | Q | E | A | R | K | A | R | I | I | L | G | K | T | N | A | Q | Y | I | S | E | Y | S | D | Y | K | Q | Y | V | D | E | K | L | D | S | S | L | T | W | D | T | R | L | S | W | T | P | Q | F | L | Q | Q | Q | N | L | T |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
Q | G | V | Q | L | T | A | K | L | G | Y | P | I | T | D | D | L | D | I | Y | T | R | L | G | G | M | V | W | R | A | D | S | K | G | N | Y | A | S | T | G | V | S | R | S | E | H | D | . |
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T | G | V | S | P | V | F | A | G | G | V | E | W | A | V | . |
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T | R | D | I | A |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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92 | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | |
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. | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | |
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752 | . | . | . | . | . | . | . | 760 | . | . | . | . | . | . | . | . | . | 770 | . | . | . | . | . | . | . | . | . | 780 | . | . | . | . | . | . | . | . | . | 790 |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
I | S | A | D | I | L | N | V | L | D | S | K | T | A | V | D | T | T | N | T | G | V | A | T | Y | A | S | G | R | T | F | W | L | D | V | S | M | K | F |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
T | R | L | E | Y | Q | W | V | N | N | I | G | D | A | G | T | V | G | T | R | P | D | N | G | . |
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M | L | S | L | G | V | S | Y | R | F |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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159 | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | |
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. | . | . | . | . | . | . | 190 | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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