 |
Job Description | P31827 | Confidence | 1.64% | Date | Thu Jan 5 11:48:51 GMT 2012 |
Rank | 82 | Aligned Residues | 69 |
% Identity | 16% | Template | c1v8cA_ |
PDB info |
PDB header:protein binding | Chain: A: PDB Molecule:moad related protein; |
PDBTitle: crystal structure of moad related protein from thermus2 thermophilus hb8
|
Resolution | 1.60 Å |
|
 |
  |   |
102 | . | . | . | . | . | . | . | 110 | . | . | . | . | . | |
|
|
|
|
|
. | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | |
|
. | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | |
. | . | . | . | . | . | . | . | . | 170 |
Predicted Secondary structure |   |
|
|  |  |  |  |  |
|
|  |  |
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
| . |
|
|
|
|  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Y | Q | N | A | Y | L | I | D | G | I | S | A | T | N | . |
. |
. |
. |
. |
. |
N | L | N | P | A | N | E | S | D | A | S | S | A | T | N | I | S | G | M | S | . |
. |
Q | G | Y | Y | L | D | V | S | L | L | D | N | V | T | L | Y | D | S | F | V | P | V | E | F | G | . |
R | F | N | G | G | V | I | D | A | K |
Query Conservation |   |
  |   |   |   |   |   |
|
|
|   |   |   |   |   | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . |   |   |   |   |
|   |   |   |   |
|
|   |
|
|
|
|
|
|   |   |
|   |   |
|
| . |   |
|   |
|
|
|
|
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |
|
|
|
|
|
|   |
|   |   |
|   |
|
|   |
|
|
|   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |
|   |
Template Sequence |   |
E | R | V | S | V | F | L | E | G | R | D | V | R | Y | L | Q | G | L | S | T | P | L | S | P | G | A | T | L | D | L | F | P | P | V | A | G | G | G | F | E | R | T | F | G | A | F | P | P | W | L | L | E | R | Y | L | E | E | W | G | G | T | R | E | G | E | G | V | Y | R | L | P | G | A | V | V | R | F | R |
Template Known Secondary structure |   |
T | T |
|  |  |  |  | T | T |  |  | G | G | G | T | T | G | G | G |
| B |
|
| T | T |
|  |  |  |  |  |
| S |
|
| S |  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  | T | T |  |  |  |  | T | T |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
51 | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|