 |
| Job Description | P0AEB5 | | Confidence | 17.48% | Date | Thu Jan 5 11:22:57 GMT 2012 |
| Rank | 75 | Aligned Residues | 29 |
| % Identity | 28% | Template | c3pifD_ |
| PDB info |
PDB header:hydrolase | Chain: D: PDB Molecule:5'->3' exoribonuclease (xrn1); |
PDBTitle: crystal structure of the 5'->3' exoribonuclease xrn1, e178q mutant in2 complex with manganese
|
| Resolution | 2.92 Å |
|
| | |
172 | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | |
. | . | . | 190 | |
|
|
|
|
. | . | . | . | . | . | . | . | . | 200 |
| Predicted Secondary structure | |
 | | | |
|
|
|  | |  |
|
| | | | . | |
|
|
| . | . | . | . | . | | | | | | | | | | |
| Query SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
| Query Sequence | |
M | L | Y | F | D | R | P | F | S | I | G | D | W | I | R | . |
S | P | D | R | . |
. |
. |
. |
. |
N | I | E | G | T | V | A | E | I | G |
| Query Conservation | |
|
| | | | |
|
| |
|
|
| |
| | . |
| | | | . | . | . | . | . | | | |
| |
| | |
| |
| Alig confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
| Template Conservation | |
| |
| | |
| |
| |
|
|
|
|
|
| |
| | |
|
| |
|
| |
| |
|
|
|
|
|
|
| |
| Template Sequence | |
V | L | L | R | S | Q | R | F | H | L | G | D | R | V | M | Y | I | Q | D | S | G | K | V | P | L | H | S | K | G | T | V | V | G | Y | T |
| Template Known Secondary structure | |
| | | | T | S |
|
|
| T | T |
| | | | |
|
| S | S | S | S | S |
| T | T |
| | | | | | | | |
| Template Predicted Secondary structure | |
|
|
|
|
|
|
|
|
|
|
|
| | | | | |
|
|
|
|
|
|
| | | | | | | | | | | |
| Template SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| | |
1157 | . | . | 1160 | . | . | . | . | . | . | . | . | . | 1170 | . | . | . | . | . | . | . | . | . | 1180 | . | . | . | . | . | . | . | . | . | 1190 | . |
| |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
| |
|
|
|
