Job Description P0AEB5 Confidence 73.31% Date Thu Jan 5 11:22:57 GMT 2012 Rank 8 Aligned Residues 46 % Identity 17% Template c2e6zA_ PDB info PDB header:transcription Chain: A: PDB Molecule:transcription elongation factor spt5; PDBTitle: solution structure of the second kow motif of human2 transcription elongation factor spt5 Resolution UNK

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190				.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.				.	.	.	.	.	.	.	220	.
Predicted Secondary structure																	.	.	.																							.	.	.
Query SS confidence																	.	.	.																							.	.	.
Query Sequence		D	R	P	F	S	I	G	D	W	I	R	S	P	D	R	.	.	.	N	I	E	G	T	V	A	E	I	G	W	R	I	T	K	I	T	T	F	D	N	R	.	.	.	P	L	Y	V	P	N	S	L	F
Query Conservation																	.	.	.																							.	.	.
Alig confidence																	.	.	.																							.	.	.
Template Conservation
Template Sequence		S	S	G	F	Q	P	G	D	N	V	E	V	C	E	G	E	L	I	N	L	Q	G	K	I	L	S	V	D	G	N	K	I	T	I	M	P	K	H	E	D	L	K	D	M	L	E	F	P	A	Q	E	L
Template Known Secondary structure			S	S			T	T	S						S	S	T	T	T	T									B	T	T									S	S			S						T	T	T
Template Predicted Secondary structure
Template SS confidence
		417	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions