Job Description P0A930 Confidence 56.46% Date Thu Jan 5 11:09:15 GMT 2012 Rank 10 Aligned Residues 110 % Identity 15% Template c3rnsA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:cupin 2 conserved barrel domain protein; PDBTitle: cupin 2 conserved barrel domain protein from leptotrichia buccalis Resolution 2.07 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.					.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
Predicted Secondary structure																																																						.	.	.	.
Query SS confidence																																																						.	.	.	.
Query Sequence		N	Q	N	R	L	L	Y	P	G	D	I	L	Y	V	P	R	N	D	D	L	K	V	F	V	M	G	E	V	K	K	Q	S	T	L	K	M	D	F	S	G	M	T	L	T	E	A	L	G	N	A	E	G	.	.	.	.	I	D	M	T	T	S	N	A	S	G	I	F	V	I	R	P	L	K	G	E	G	G	R	N
Query Conservation																																																						.	.	.	.
Alig confidence																																						.																.	.	.	.
Template Conservation																																						.
Template Sequence		N	N	K	K	T	I	S	N	G	D	F	L	E	I	T	A	N	H	N	Y	S	I	E	A	R	D	N	L	K	L	I	E	I	G	E	K	.	I	S	A	F	N	L	A	E	V	V	E	Y	Q	E	G	K	I	V	S	K	N	L	V	A	K	P	N	L	V	X	T	I	X	S	F	W	K	G	E	S	L	D	P
Template Known Secondary structure		S							T	T							S	S								S	S	S										.						S	G	G	G	S				T	T											T	T										T	T
Template Predicted Secondary structure																																						.
Template SS confidence
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.		.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
		312	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.			.	.	.	.	.	.	.	.	340	.	.	.	.	.	.
Predicted Secondary structure																						.	.
Query SS confidence																						.	.
Query Sequence		G	K	I	A	N	I	Y	Q	L	D	M	S	D	A	T	S	L	V	M	A	.	.	T	E	F	R	L	Q	P	Y	D	V	V	Y	V	T	T
Query Conservation																						.	.
Alig confidence																						.	.
Template Conservation
Template Sequence		H	K	A	P	G	D	A	L	V	T	V	L	D	G	E	G	K	Y	Y	V	D	G	K	P	F	I	V	K	K	G	E	S	A	V	L	P	A
Template Known Secondary structure					S	S																T	T							T	T							T
Template Predicted Secondary structure
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions