Job Description P0A930 Confidence 99.82% Date Thu Jan 5 11:09:15 GMT 2012 Rank 3 Aligned Residues 169 % Identity 17% Template c3p42D_ PDB info PDB header:unknown function Chain: D: PDB Molecule:predicted protein; PDBTitle: structure of gfcc (ymcb), protein encoded by the e. coli group 42 capsule operon Resolution 1.91 Å

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		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	Q	K	A	Y	I	S	G	Q	V	N	K	S	G	Q	Q	A	I	T	N	V	P	L	T	I	L	D	A	I	N	A	A	G	G	L	T	D	T	A	D	W	R	N	V	V	L	T	H	N	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.									.												.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.	.	.									.												.
Template Sequence		X	V	T	I	Y	L	P	G	E	.	.	.	Q	Q	T	L	S	V	G	P	.	V	E	N	V	A	Q	L	V	T	Q	P	.	Q	L	R	D	R	L	W	W	P	G	A	L	L	T	D	S	A	A	K	A	K	A	L	K	D	Y	Q	H	V	X	A	Q	L	A	S	W	E	A	E	A	D	D	D	V	A	A	T
Template Known Secondary structure								T	T		.	.	.	S								.		S	B								T	.	T	T	T	T	T	S		G	G	G																														S
Template Predicted Secondary structure											.	.	.									.												.
Template SS confidence
		25	.	.	.	.	30	.	.	.				.	.	.	.	.	.	40	.		.	.	.	.	.	.	.	.	50	.	.		.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
																220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	E	E	R	I	S	L	Q	A	L	M	Q	N	G	D	L	N	Q	N	R	L	L	Y	P	G	D	I	L	Y	V	P	R	N	D	D	L	K	V	F	V	M	G	E	V	K	K	Q	S	T	L	K	M	D	F	S	G	M	T	L	T	E	A	L	G	N	A
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.																				.
Template Conservation																																																.																				.
Template Sequence		I	K	S	V	R	Q	Q	L	L	N	L	N	I	T	G	R	L	P	V	K	L	D	P	D	F	V	R	V	D	E	N	S	N	P	P	L	V	G	D	Y	T	L	Y	T	V	Q	.	R	P	V	T	I	T	L	L	G	A	V	S	G	A	G	Q	L	P	W	.	L	A	G	R	S	V	T	D	Y	L	Q	D	H
Template Known Secondary structure									T	T	T								S					T	T					S	T	T	S	S		B			S									.			S							S	B	T	T							.		T	T								T	T
Template Predicted Secondary structure																																																.																				.
Template SS confidence
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.		.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.		.	.	.	.	.	170	.	.	.	.	.	.	.
		286	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.							.	350	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																	.	.	.	.	.	.
Query SS confidence																																																																	.	.	.	.	.	.
Query Sequence		E	G	I	D	M	T	T	S	N	A	S	G	I	F	V	I	R	P	L	K	G	E	G	G	R	N	G	K	I	A	N	I	Y	Q	L	D	M	S	D	A	T	S	L	V	M	A	T	E	F	R	L	Q	P	Y	D	V	V	Y	V	T	T	A	P	.	.	.	.	.	.	V	S	R	W	N	R	L	I	N	Q	L
Query Conservation																																																																	.	.	.	.	.	.
Alig confidence					.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.
Template Conservation					.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	R	L	.	.	A	G	A	D	K	N	N	V	X	V	I	T	P	E	G	E	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	V	A	P	V	A	L	W	N	K	R	H	V	E	P	P	P	G	S	Q	L	W	L	G	F	S	A	H	V	L	P	E	K	Y	A	D	L	N	D	Q	I	V	S	V
Template Known Secondary structure			B		.	.	T	T	B		S	S							T	T	S			.	.	.	.	.	.	.	.	.	.	.	.	.	.						S		S	S								T	T							B		T	T	T	S		G	G	G	T	T
Template Predicted Secondary structure					.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		178	.	180			.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.															.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
		360	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	T
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		242	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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