 |
Job Description | P0A7R1 | Confidence | 8.94% | Date | Thu Jan 5 11:06:05 GMT 2012 |
Rank | 92 | Aligned Residues | 35 |
% Identity | 20% | Template | d2b78a1 |
SCOP info | PUA domain-like
| PUA domain-like
| Hypothetical RNA methyltransferase domain (HRMD)
|
Resolution | 2.00 |
|
  |   |
3 | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | |
|
|
|
. | . | . | . | 30 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
| . | . | . | . |  |  |  |  |  |
|
|
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | I | L | L | D | K | V | A | N | L | G | S | L | G | D | Q | V | N | V | K | A | G | Y | . |
. |
. |
. |
A | R | N | F | L | V | P | Q | G | K | A | V |
Query Conservation |   |
|
|
|   |   |
|
|   |   |
|
|
|   |
|
|
|
|   |
|
|   |
|
| . | . | . | . |
|
|
|
|
|
|
|   |   |
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |   |
|
|
|   |   |   |   |   |
|
|   |   |
|   |
|   |   |   |   |
|
|
|
|
|   |   |
|   |
|
|
|
|
|
|
|
Template Sequence |   |
L | L | S | S | R | D | Y | P | N | L | N | L | D | N | Q | V | V | Q | L | Y | S | D | A | D | I | F | L | G | T | A | Y | L | S | K | Q | N | K | G | V |
Template Known Secondary structure |   |
 |  |  | G | G | G | S | T | T |
|
|
|
| S |  |  |  |  |  |  |
| T | T |
|
|  |  |  |  |  |  |  |  |  |  | T | T |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|