Job Description P0A7R1 Confidence 100.00% Date Thu Jan 5 11:06:05 GMT 2012 Rank 2 Aligned Residues 146 % Identity 40% Template c2b66I_ PDB info PDB header:ribosome Chain: I: PDB Molecule:50s ribosomal protein l9; PDBTitle: 50s ribosomal subunit from a crystal structure of release factor rf1,2 trnas and mrna bound to the ribosome. this file contains the 50s3 subunit from a crystal structure of release factor rf1, trnas and4 mrna bound to the ribosome and is described in remark 400 Resolution 5.90 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	Q	V	I	L	L	D	K	V	A	N	L	G	S	L	G	D	Q	V	N	V	K	A	G	Y	A	R	N	F	L	V	P	Q	G	K	A	V	P	A	T	K	K	N	I	E	F	F	E	A	R	R	A	E	L	E	A	K	L	A	E	V	L	A	A	A	N	A	R	A	E	K	I	N	A	L	E	T	V	T	I
Query Conservation
Alig confidence																																																																													.
Template Conservation																																																																													.
Template Sequence		M	K	V	I	F	L	K	D	V	K	G	K	G	K	K	G	E	I	K	N	V	A	D	G	Y	A	N	N	F	L	F	K	Q	G	L	A	I	E	A	T	P	A	N	L	K	A	L	E	A	Q	K	Q	K	E	Q	R	Q	A	A	E	E	L	A	N	A	K	K	L	K	E	Q	L	E	K	L	.	T	V	T	I
Template Known Secondary structure				B			S	S		S	S	S				S	S															T	T	S	S	S			B		T																								S	T	T							T	T	S	.
Template Predicted Secondary structure																																																																													.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.		.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.		.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																												.
Query SS confidence																												.
Query Sequence		A	S	K	A	G	D	E	G	K	L	F	G	S	I	G	T	R	D	I	A	D	A	V	T	A	A	.	G	V	E	V	A	K	S	E	V	R	L	P	N	G	V	L	R	T	T	G	E	H	E	V	S	F	Q	V	H	S	E	V	F	A	K	V	I	V	N	V	V	A	E
Query Conservation																												.
Alig confidence							.																					.														.
Template Conservation							.																																			.
Template Sequence		P	A	K	A	G	.	E	G	R	L	F	G	S	I	T	S	K	Q	I	A	E	S	L	Q	A	Q	H	G	L	K	L	D	K	R	K	I	E	L	A	D	.	A	I	R	A	L	G	Y	T	N	V	P	V	K	L	H	P	E	V	T	A	T	L	K	V	H	V	T	E	Q
Template Known Secondary structure						S	.					S	S													T	T	T						S	S		S			S	S	.						S	B								S	S	S
Template Predicted Secondary structure							.																																			.
Template SS confidence
		80	.	.	.	.		.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.		.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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