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Job DescriptionP08370
Confidence3.43%DateThu Jan 5 11:01:18 GMT 2012
Rank58Aligned Residues24
% Identity25%Templatec2x7rA_
PDB info PDB header:viral proteinChain: A: PDB Molecule:transmembrane protein gp41; PDBTitle: crystal structure of a late fusion intermediate of hiv-12 gp41
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   23......30.........40......
Predicted Secondary structure 
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Query Sequence  LLQGMSQQDRSFASRVSMESQSLR
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Template Sequence  LLSGIVQQQNNLLRAIEAQQHLLQ
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   544.....550.........560.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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