 |
Job Description | P0A7A9 | Confidence | 6.10% | Date | Thu Jan 5 11:05:14 GMT 2012 |
Rank | 37 | Aligned Residues | 35 |
% Identity | 20% | Template | d2ghpa2 |
SCOP info | Ferredoxin-like
| RNA-binding domain, RBD
| Canonical RBD
|
Resolution | 2.70 |
|
  |   |
133 | . | . | . | . | . | . | 140 | . | . | |
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | Q | I | A | H | F | F | E | H | Y | . |
. |
. |
. |
. |
. |
. |
. |
. |
K | D | L | E | K | G | K | W | V | K | V | E | G | W | E | N | A | E | A | A | K | A | E | I | V |
Query Conservation |   |
  |   |
|   |   |
|
|   |   |
| . | . | . | . | . | . | . | . | . |
|   |
|
|   |   |
|   |   |   |   |   |
|   |   |
|   |   |   |
|   |   |
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |   |
|   |   |   |
|   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|
|
|   |
|   |   |   |   |   |
|   |   |
|
|   |
Template Sequence |   |
N | K | V | Y | K | Y | F | K | H | C | G | P | I | I | H | V | D | V | A | D | S | L | K | K | N | F | R | F | A | R | I | E | F | A | R | Y | D | G | A | L | A | A | I | T |
Template Known Secondary structure |   |
 |  |  |  |  |  |  | G | G | G | S |
|  |  |  |  |  |  |  |  |
| T | T | S | S | S |  |  |  |  |  |  |  | S | S |  |  |  |  |  |  |  |  | T |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
55 | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|