 |
Job Description | P0A7A9 | Confidence | 4.23% | Date | Thu Jan 5 11:05:14 GMT 2012 |
Rank | 70 | Aligned Residues | 36 |
% Identity | 17% | Template | d1wg1a_ |
SCOP info | Ferredoxin-like
| RNA-binding domain, RBD
| Canonical RBD
|
Resolution | UNK |
|
  |   |
133 | . | . | . | . | . | . | 140 | . | . | . | . | . | . | |
|
|
|
. | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|
| . | . | . | . |
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | Q | I | A | H | F | F | E | H | Y | K | D | L | E | . |
. |
. |
. |
K | G | K | W | V | K | V | E | G | W | E | N | A | E | A | A | K | A | E | I | V | A |
Query Conservation |   |
  |   |
|   |   |
|
|   |   |
|
|   |
|
| . | . | . | . |   |   |
|   |   |   |   |   |
|   |   |
|   |   |   |
|   |   |
|
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|
|   |
|   |   |   |   |   |
|   |   |
|
|   |   |
Template Sequence |   |
Q | E | V | H | D | L | L | K | D | Y | D | L | K | Y | C | Y | V | D | R | N | K | R | T | A | F | V | T | L | L | N | G | E | Q | A | Q | N | A | I | Q | M |
Template Known Secondary structure |   |
 |  |  |  |  |  | T |
| S | S |
|
|
|
|  |  |  |  | G | G | G | T |  |  |  |  |
|
| S |
|  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
109 | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|