 |
Job Description | P0A7A9 | Confidence | 11.34% | Date | Thu Jan 5 11:05:14 GMT 2012 |
Rank | 21 | Aligned Residues | 36 |
% Identity | 25% | Template | d1go3e1 |
SCOP info | OB-fold
| Nucleic acid-binding proteins
| Cold shock DNA-binding domain-like
|
Resolution | 1.75 |
|
  |   |
57 | . | . | 60 | . | . | |
|
|
|
|
|
. | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | Y | I | N | H | T | . |
. |
. |
. |
. |
. |
L | S | L | D | G | D | P | V | D | V | L | V | P | T | P | Y | P | L | Q | P | G | S | V | I | R | C | R | P | V | G | V |
Query Conservation |   |
|
|
|
|   |
| . | . | . | . | . | . |   |   |   |
|
|
|
|
|
|
|   |
|
|   |   |   |   |   |   |   |
|   |
|
|   |   |
|   |
|
|   |
Alig confidence |   |
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . |   |   |   |
|
|   |
|   |
|
|
|   |   |
|
Template Sequence |   |
G | L | I | H | V | S | Q | I | M | D | D | Y | V | S | Y | D | P | K | A | I | I | G | K | E | T | G | K | V | . |
L | E | I | G | D | Y | V | R | A | R | I | V | A | I |
Template Known Secondary structure |   |
 |  |  |  | G | G | G | S |
| S | S |
|  |  |  |
|
|
|
|  |  |  | T | T | T |
|
|  | . |  |
| T | T |
|  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  | . |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
106 | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | |
. | . | . | . | . | . | 140 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|