Return to main results Retrieve Phyre Job Id

Job DescriptionP77580
Confidence82.44%DateThu Jan 5 12:30:45 GMT 2012
Rank332Aligned Residues137
% Identity19%Templated1k3ta1
SCOP infoNAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
Resolution1.95

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20...... ...30.........40.........
Predicted Secondary structure 





...





..............................
Query SS confidence 























. . .






















. . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Sequence  KRKVAIIGSGNIGTDLMIKILRHG. . . QHLEMAVMVGIDPQSDGLARARR. . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Conservation 
  






 





 

 
 
...  
   
 


   
 

 

  ..............................
Alig confidence 























...






















..............................
Template Conservation   












 



          







   
    



 





 
   
              
 

Template Sequence  PIKVGINGFGRIGRMVFQALCEDGLLGTEIDVVAVVDMNTDAEYFAYQMRYDTVHGKFKYEVTTTKSSPSVAKDDTLVVN
Template Known Secondary structure 


STT
BTTTS


TTT
SS

SSTT
SS

T
Template Predicted Secondary structure 






































Template SS confidence 















































































   2.......10.........20.........30.........40.........50.........60.........70.........80.
 
   50.........60.........70.........80.........90.........100........ .110.........120
Predicted Secondary structure  ......






















..

.
Query SS confidence  . . . . . .


























































. .











.
Query Sequence  . . . . . . MGVATTHEGVIGLMNMPEFADIDIVFDATSAGAHVKNDAALREAKPDIRLIDLTPAAIG. . PYCVPVVNLEAN.
Query Conservation  ......


 

  



 
   

  









 

  
   
  
  

  





 

..   

 

    .
Alig confidence  ......










.




....






















..












..











.
Template Conservation 
  
  
    

  

.
   
....








 
 
 
 
  

  ..









  
   
 
 


   

Template Sequence  GHRILCVKAQRNPADLP. WGKLG. . . . VEYVIESTGLFTAKAAAEGHLRG. . GARKVVISAPASGGAKTLVMGVNHHEYN
Template Known Secondary structure  T

S
GGGS
.T....


SSS

BTT..T
SSS

BSS


TTTTGGG

Template Predicted Secondary structure 





.

....










..

















Template SS confidence 















































































   82.......90........ .100... ......110.........120...... ...130.........140.........150....
 
   121........130.........140......
Predicted Secondary structure  .








Query SS confidence  .

























Query Sequence  . VDQLNVNMVTCGGQATIPMVAAVSRV
Query Conservation  .    














  

   
Alig confidence  .

























Template Conservation       










   

 

   
Template Sequence  PSEHHVVSNADNEWGYSHRVVDLVRHM
Template Known Secondary structure  TTT
S


TT
Template Predicted Secondary structure 






Template SS confidence 


























   155....160.........170.........180.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions