 |
Job Description | P77580 | Confidence | 97.71% | Date | Thu Jan 5 12:30:45 GMT 2012 |
Rank | 84 | Aligned Residues | 95 |
% Identity | 19% | Template | d1ebfa1 |
SCOP info | NAD(P)-binding Rossmann-fold domains
| NAD(P)-binding Rossmann-fold domains
| Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
|
Resolution | 2.30 |
|
 |
  |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | S | K | R | K | V | A | I | I | G | S | G | N | I | G | T | D | L | M | I | K | I | L | R | H | G | Q | H | L | E | M | A | V | M | V | G | I | D | P | Q | S | D | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
G | L | A | R | A | R | R | M | G | V | A | T | T | H | E | G | V | I | G | L | M | N |
Query Conservation |   |
  |   |
|   |   |
|
|
|
|
|
|
|   |
|
|
|
|
|
|   |
|
|   |
|   |
|   |   |
|   |   |   |
|   |
|
|
|   |   |   |
|   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|   |
|
|   |   |
|
|
|   |
|
|   |   |
|
|
|
|   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |
|   |
|   |
|
|
|   |
|   |
|
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
Template Sequence |   |
T | K | V | V | N | V | A | V | I | G | A | G | V | V | G | S | A | F | L | D | Q | L | L | A | M | K | S | T | I | T | Y | N | L | V | L | L | A | E | A | E | R | S | L | I | S | K | D | F | S | P | L | N | V | G | S | D | W | K | A | A | L | A | A | S | T | T | K | T | L | P | L | D | D | L | I | A | H | L | K | T |
Template Known Secondary structure |   |
| S |  |  |  |  |  |  |  |
|
| S |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| S | S |  |  |  |  |  |  |  |  |
| S | S | B |  |  |  |
| S | S |
| S |
|
| S |
| T | T |
|  |  |  |  |  |  | T |
|
|
| B |
|
|
|  |  |  |  |  |  |  |  | T | T |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
3 | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . |
  |
  |   |
65 | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 |
Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | P | E | F | A | D | I | D | I | V | F | D | A | T | S | A | G | A | H | V | K | N | D | A | A | L | R | E | A | K | P | D | I | R | L | I |
Query Conservation |   |
  |   |
|
|   |   |
|
|
|
|
|
|
|
|
|
|   |
|
|   |   |
|   |   |   |
|   |   |
|   |   |
|
|   |   |
|
Alig confidence |   |
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
Template Conservation |   |
  |   |   | . | . | . |   |
|
|
|
|   |   |
|   |   |   |   |
|   |   |   |   |   |   |
|
|   |   | . | . |
|   |
|
|
|
Template Sequence |   |
S | P | K | . |
. |
. |
P | V | I | L | V | D | N | T | S | S | A | Y | I | A | G | F | Y | T | K | F | V | E | N | . |
. |
G | I | S | I | A |
Template Known Secondary structure |   |
| S | S | . | . | . |
|  |  |  |  |  |
| S |
|
|  |  |  |  | T | T |  |  |  |  |  |  | T | . | . | T |
|  |  |  |
Template Predicted Secondary structure |   |
|
|
| . | . | . |
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
| . | . |
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
83 | . | . | |
|
|
. | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | |
|
. | 110 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|