Job Description P77580 Confidence 73.22% Date Thu Jan 5 12:30:45 GMT 2012 Rank 414 Aligned Residues 95 % Identity 19% Template c3tozA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:shikimate dehydrogenase; PDBTitle: 2.2 angstrom crystal structure of shikimate 5-dehydrogenase from2 listeria monocytogenes in complex with nad. Resolution 2.20 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40		.	.	.	.	.	.	.	.	.									50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
Predicted Secondary structure																																										.										.	.	.	.	.	.	.	.
Query SS confidence																																										.										.	.	.	.	.	.	.	.
Query Sequence		M	S	K	R	K	V	A	I	I	G	S	G	N	I	G	T	D	L	M	I	K	I	L	R	H	G	Q	H	L	E	M	A	V	M	V	G	I	D	P	Q	.	S	D	G	L	A	R	A	R	R	.	.	.	.	.	.	.	.	M	G	V	A	T	T	H	E	G	V	I	G	L	M	N	M	P	E	F	A	D	I
Query Conservation																																										.										.	.	.	.	.	.	.	.
Alig confidence																													.	.												.										.	.	.	.	.	.	.	.																			.	.
Template Conservation																													.	.																																																.	.
Template Sequence		I	I	G	K	K	M	T	I	C	G	A	G	G	A	A	T	A	I	C	I	Q	A	A	L	D	G	V	.	.	K	E	I	S	I	F	N	R	K	D	D	F	Y	A	N	A	E	K	T	V	E	K	I	N	S	K	T	D	C	K	A	Q	L	F	D	I	E	D	H	E	Q	L	R	K	E	I	A	.	.	E	S
Template Known Secondary structure			T	T	S								S														T		.	.									S	S	T	T															S	S								T	T											.	.	T
Template Predicted Secondary structure																													.	.																																																.	.
Template SS confidence
		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.			.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.			.	.
		72	.	.	.	.	.	.	.	80	.	.	.								.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
Predicted Secondary structure														.	.	.	.	.	.	.
Query SS confidence														.	.	.	.	.	.	.
Query Sequence		D	I	V	F	D	A	T	S	A	G	A	H	.	.	.	.	.	.	.	V	K	N	D	A	A	L	R	E	A	K	P	D	I	R	L	I	D	L
Query Conservation														.	.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.	.										.	.	.
Template Conservation																														.	.	.
Template Sequence		V	I	F	T	N	A	T	G	V	G	M	K	P	F	E	G	E	T	L	L	P	S	A	D	M	L	R	P	.	.	.	E	L	I	V	S	D	V
Template Known Secondary structure		S						S	S	T	T	S	T	T	S	T	T			S				G	G	G			T	.	.	.	T						S
Template Predicted Secondary structure																														.	.	.
Template SS confidence
		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.				.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions