 |
Job Description | P77580 | Confidence | 72.87% | Date | Thu Jan 5 12:30:45 GMT 2012 |
Rank | 417 | Aligned Residues | 67 |
% Identity | 15% | Template | c3qy9C_ |
PDB info |
PDB header:oxidoreductase | Chain: C: PDB Molecule:dihydrodipicolinate reductase; |
PDBTitle: the crystal structure of dihydrodipicolinate reductase from2 staphylococcus aureus
|
Resolution | 1.80 Å |
|
 |
  |   |
4 | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | K | V | A | I | I | G | S | G | N | I | G | T | D | L | M | I | K | I | L | R | H | G | Q | H | L | E | M | A | V | M | V | G | I | D | P | Q | S | D | G | L | A | R | A | R | R | M | G | V | A | T | T | H | E | G | V | I | G | L | M | N | M | P | E | F | A | D | I | D | I | V | F | D | A | T | S | A | G | A | H |
Query Conservation |   |
  |   |
|
|
|
|
|
|
|   |
|
|
|
|
|
|   |
|
|   |
|   |
|   |   |
|   |   |   |
|   |
|
|
|   |   |   |
|   |
|
|   |
|
|   |   |
|
|
|   |
|
|   |   |
|
|
|
|   |
|   |   |   |
|
|   |   |
|
|
|
|
|
|
|
|
|
|   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|   |
|   |
|   |
|
|
|
|   |   |
|   | . |   |   |   |   | . |   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|
|
|   |
|   |   |   |
Template Sequence |   |
M | K | I | L | L | I | G | Y | G | A | M | N | Q | R | V | A | . |
R | L | A | E | . |
E | K | G | H | E | I | V | G | V | I | E | N | T | P | K | A | T | T | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
P | Y | Q | Q | Y | Q | H | I | A | D | V | K | G | A | D | V | A | I | D | F | S | N | P | N | L | L |
Template Known Secondary structure |   |
|  |  |  |  |  |
|
| S |  |  |  |  |  |  |  | . |  |  |  |  | . |  | T | T |
|  |  |  |  |  |  |
| S | S |
|
| T | T |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
| S |
|  |  | S |
| G | G | G |
| T | T |
|
|  |  |  |  |  |
|
| G | G | G |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  | . |  |  |  |  | . |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | |
. | . | . | 20 | |
. | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
. | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . |
  |
  |   |
84 | . | . |
Predicted Secondary structure |   |
 |  |  |
Query SS confidence |   |
|
|
|
Query Sequence |   |
V | K | N |
Query Conservation |   |
  |   |
|
Alig confidence |   |
|
|
|
Template Conservation |   |
  |   |   |
Template Sequence |   |
F | P | L |
Template Known Secondary structure |   |
G | G | G |
Template Predicted Secondary structure |   |
 |  |  |
Template SS confidence |   |
|
|
|
  |   |
65 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|