Return to main results Retrieve Phyre Job Id

Job DescriptionP77580
Confidence95.24%DateThu Jan 5 12:30:45 GMT 2012
Rank173Aligned Residues97
% Identity20%Templatec3p2yA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:alanine dehydrogenase/pyridine nucleotide transhydrogenase; PDBTitle: crystal structure of alanine dehydrogenase/pyridine nucleotide2 transhydrogenase from mycobacterium smegmatis
Resolution1.82 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30.........40.........50...... ...60.........70..
Predicted Secondary structure 

















...........





Query SS confidence 




















































. . . . . . . . . . .















Query Sequence  RKVAIIGSGNIGTDLMIKILRHGQHLEMAVMVGIDPQSDGLARARRMGVATTH. . . . . . . . . . . EGVIGLMNMPEFADID
Query Conservation    






 





 

 
 
  
   
 


   
 

 

  


 

 ........... 



 
   

  

Alig confidence 
























.....






















...........







.....


Template Conservation    
 


 
 

  

     

  .....
   
            
                  
   
 ..... 

Template Sequence  ASALVLGVGVAGLQALATAKRLGAK. . . . . TTGYDVRPEVAEQVRSVGAQWLDLGSEAERAQQQQALEDAIT. . . . . KFD
Template Known Secondary structure 
S
ST
.....
SSGGGTT





T.....T
S
Template Predicted Secondary structure 






.....













.....


Template SS confidence 















































































   164.....170.........180........ .190.........200.........210.........220.........230 ...
 
   73.... ..80.........90.........100.........110
Predicted Secondary structure 
....









Query SS confidence 




. . . .
































Query Sequence  IVFDA. . . . TSAGAHVKNDAALREAKPDIRLIDLTPAAIGPY
Query Conservation 




....


 

  
   
  
  

  





 

  
Alig confidence 




....
































Template Conservation 


            

    
  

 
 





 
 

 
Template Sequence  IVITTALVPGRPAPRLVTAAAATGMQPGSVVVDLAGETGGNC
Template Known Secondary structure 



TTS




B
TS
TT
TTGGGT
SB
Template Predicted Secondary structure 


























Template SS confidence 









































   247..250.........260.........270.........280........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions