 |
Job Description | P77580 | Confidence | 93.58% | Date | Thu Jan 5 12:30:45 GMT 2012 |
Rank | 212 | Aligned Residues | 94 |
% Identity | 17% | Template | c3oa2B_ |
PDB info |
PDB header:oxidoreductase | Chain: B: PDB Molecule:wbpb; |
PDBTitle: crystal structure of the wlba (wbpb) dehydrogenase from pseudomonas2 aeruginosa in complex with nad at 1.5 angstrom resolution
|
Resolution | 1.50 Å |
|
 |
  |   |
4 | . | . | . | . | . | 10 | . | |
. | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | |
|
|
. | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |
| . |
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  | . | . | . |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | K | V | A | I | I | G | S | . |
G | N | I | G | T | D | L | M | I | K | I | L | R | H | G | Q | H | L | E | M | A | V | M | V | G | I | D | P | Q | S | D | G | L | A | R | A | R | R | M | G | V | A | T | T | H | E | G | V | I | G | L | . |
. |
. |
M | N | M | P | E | F | A | D | I | D | I | V | F | D | A | T | S |
Query Conservation |   |
  |   |
|
|
|
|
|
| . |
|   |
|
|
|
|
|
|   |
|
|   |
|   |
|   |   |
|   |   |   |
|   |
|
|
|   |   |   |
|   |
|
|   |
|
|   |   |
|
|
|   |
|
|   |   |
|
|
|
|   | . | . | . |
|   |   |   |
|
|   |   |
|
|
|
|
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |
|
|
|
|   |
|
|   |   |   |   |   |
|   |   |   |   | . |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|
|   |
|   |
|   |
|
|
Template Sequence |   |
K | N | F | A | L | I | G | A | A | G | Y | I | A | P | R | H | M | R | A | I | . |
K | D | T | G | N | C | L | V | S | A | Y | D | I | N | D | S | V | G | I | I | D | S | I | S | P | Q | S | E | F | F | T | E | F | E | F | F | L | D | H | A | S | N | L | K | R | D | S | A | T | A | L | D | Y | V | S | I | C | S | P |
Template Known Secondary structure |   |
|  |  |  |  |  | S | T | T | S | S | S |  |  |  |  |  |  |  |  | . |  |  | T | T |
|  |  |  |  |  |  |
| S | S |
|
|
| G | G | G | G | G | T |
| T | T |
|  |  |  | S | S |  |  |  |  |  |  |  |  |  |  |  | T | T | S | T | T | T | S |
|
|  |  |  |  |
| S |
|
Template Predicted Secondary structure |   |
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  | . |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | |
. | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 |
  |
  |   |
80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | G | A | H | V | K | N | D | A | A | L | R | E | A | K | P | D | I | R | L | I |
Query Conservation |   |
|   |
|
|   |   |
|   |   |   |
|   |   |
|   |   |
|
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |   |   |   |   |   |
|
|   |
| . | . |
|
|
|
|   |
Template Sequence |   |
N | Y | L | H | Y | P | H | I | A | A | G | L | R | L | . |
. |
G | C | D | V | I |
Template Known Secondary structure |   |
G | G | G |  |  |  |  |  |  |  |  |  |  | T | . | . | T |
|  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |
| . | . |
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
81 | . | . | . | . | . | . | . | . | 90 | . | . | . | . | |
|
. | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|