Job Description P77580 Confidence 98.03% Date Thu Jan 5 12:30:45 GMT 2012 Rank 66 Aligned Residues 148 % Identity 22% Template c3hq4R_ PDB info PDB header:oxidoreductase Chain: R: PDB Molecule:glyceraldehyde-3-phosphate dehydrogenase 1; PDBTitle: crystal structure of c151s mutant of glyceraldehyde-3-phosphate2 dehydrogenase 1 (gapdh1) complexed with nad from staphylococcus3 aureus mrsa252 at 2.2 angstrom resolution Resolution 2.20 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.																								.	.	.	.	.	.	.	.	60
Predicted Secondary structure																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	K	V	A	I	I	G	S	G	N	I	G	T	D	L	M	I	K	I	L	R	H	G	Q	H	L	E	M	A	V	M	V	G	I	D	P	Q	S	D	G	L	A	R	A	R	R	M	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	A	T	T	H	E	G	V	I
Query Conservation																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.													.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																							.													.
Template Sequence		V	K	V	A	I	N	G	F	G	R	I	G	R	L	A	F	R	R	I	Q	E	.	V	E	G	L	E	V	V	A	V	N	D	L	.	T	D	D	D	M	L	A	H	L	L	K	Y	D	T	M	Q	G	R	F	T	G	E	V	E	V	V	D	G	G	F	R	V	N	G	K	E	V	K	S	F	S	E	P	D	A
Template Known Secondary structure										S											T	T	.	S	T	T									S	.	S													T	T	T					S						T	T					T	T									S		G
Template Predicted Secondary structure																							.													.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.		.	.	.	.	.	.	30	.	.	.	.	.		.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.			.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120		.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
Predicted Secondary structure																																														.	.																	.
Query SS confidence																																														.	.																	.
Query Sequence		G	L	M	N	M	P	E	F	A	D	I	D	I	V	F	D	A	T	S	A	G	A	H	V	K	N	D	A	A	L	R	E	A	K	P	D	I	R	L	I	D	L	T	P	.	.	A	A	I	G	P	Y	C	V	P	V	V	N	L	E	A	N	.	V	D	Q	L	N	V	N	M	V	T	C	G	G	Q	A	T	I
Query Conservation																																														.	.																	.
Alig confidence										.																									.	.										.	.																	.
Template Conservation										.																									.	.
Template Sequence		S	K	L	P	W	K	D	L	.	N	I	D	V	V	L	E	C	T	G	F	Y	T	D	K	D	K	A	Q	A	H	I	E	A	.	.	G	A	K	K	V	L	I	S	A	P	A	T	G	D	L	K	T	I	V	F	N	T	N	H	Q	E	L	D	G	S	E	T	V	V	S	G	A	S	S	T	T	N	S	L	A
Template Known Secondary structure		G	G	S		T	T	T	T	.	T		S						S	S	S			B											.	.	T		S					S	S			B	S	S						T	T	T	T	G	G	G			S			S
Template Predicted Secondary structure										.																									.	.
Template SS confidence
		81	.	.	.	.	.	.	.		.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.			.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	M	V	A	A	V	S	R	V	A	R	V	H	Y	A	E	I	I	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	V	A	K	V	L	N	D	D	F	G	L	V	E	G	L	M	T	T
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions