Return to main results Retrieve Phyre Job Id

Job DescriptionP77580
Confidence96.83%DateThu Jan 5 12:30:45 GMT 2012
Rank130Aligned Residues92
% Identity17%Templatec3btuD_
PDB info PDB header:transcriptionChain: D: PDB Molecule:galactose/lactose metabolism regulatory protein PDBTitle: crystal structure of the super-repressor mutant of gal80p2 from saccharomyces cerevisiae; gal80(s2) [e351k]
Resolution2.85 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10 .........20.........30.........40.........50... ......60.........70.......
Predicted Secondary structure  ....














..









Query SS confidence 






. . . .










































. .























Query Sequence  RKVAIIG. . . . SGNIGTDLMIKILRHGQHLEMAVMVGIDPQSDGLARARRMGVA. . TTHEGVIGLMNMPEFADIDIVFDA
Query Conservation    




....

 





 

 
 
  
   
 


   
 

 

  


 ..

  



 
   

  






Alig confidence 






....



























.













..













...






Template Conservation 






 
   
     
  
        




 
  .   
              
    


    ...

 
 
 
Template Sequence  IRVGFVGLNAAKGWAIKTHYPAILQLSSQFQITALYSPK. IETSIATIQRLKLSNATAFPTLESFASSST. . . IDMIVIA
Template Known Secondary structure  S

SSSSSGGGTTTTT
SS.TT
TT

SS
SS...
S
Template Predicted Secondary structure 















.










...

Template SS confidence 















































































   18.20.........30.........40.........50...... ...60.........70.........80...... ...90...
 
   78.80.........90.... .....
Predicted Secondary structure 


......


Query SS confidence 
















. . . . . .




Query Sequence  TSAGAHVKNDAALREAK. . . . . . PDIRL
Query Conservation 


 

  
   
  
 ...... 

  
Alig confidence 
















......




Template Conservation 

   
      

 

      



 
Template Sequence  IQVASHYEVVMPLLEFSKNNPNLKYLFV
Template Known Secondary structure  S
GGGGGG
TT

Template Predicted Secondary structure 












Template SS confidence 



























   94.....100.........110.........120.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions