Job Description P77580 Confidence 98.99% Date Thu Jan 5 12:30:45 GMT 2012 Rank 16 Aligned Residues 221 % Identity 21% Template c2yyyB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:glyceraldehyde-3-phosphate dehydrogenase; PDBTitle: crystal structure of glyceraldehyde-3-phosphate2 dehydrogenase Resolution 1.85 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.						.	.	.	.	.	60	.	.	.	.										.	.	.	.	.
Predicted Secondary structure																																																					.	.	.	.	.											.	.	.	.	.	.	.	.	.
Query SS confidence																																																					.	.	.	.	.											.	.	.	.	.	.	.	.	.
Query Sequence		R	K	V	A	I	I	G	S	G	N	I	G	T	D	L	M	I	K	I	L	R	H	G	Q	H	L	E	M	A	V	M	V	G	I	D	P	Q	S	D	G	L	A	R	A	R	R	M	G	V	A	T	.	.	.	.	.	T	H	E	G	V	I	G	L	M	N	.	.	.	.	.	.	.	.	.	M	P	E	F	A
Query Conservation																																																					.	.	.	.	.											.	.	.	.	.	.	.	.	.
Alig confidence																							.															.															.	.	.	.	.											.	.	.	.	.	.	.	.	.
Template Conservation																							.															.
Template Sequence		A	K	V	L	I	N	G	Y	G	S	I	G	K	R	V	A	D	A	V	S	M	.	Q	D	D	M	E	V	I	G	V	T	K	T	K	P	.	D	F	E	A	R	L	A	V	E	K	G	Y	K	L	F	V	A	I	P	D	N	E	R	V	K	L	F	E	D	A	G	I	P	V	E	G	T	I	L	D	I	I	E
Template Known Secondary structure										S													.	S	S	S									S	S		.	S									T	T						S	S													T						B	G	G	G	T	G	G
Template Predicted Secondary structure																							.															.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.		.	.	.	.	.	.	30	.	.	.	.	.	.	.		.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.					.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure																																							.	.	.	.
Query SS confidence																																							.	.	.	.
Query Sequence		D	I	D	I	V	F	D	A	T	S	A	G	A	H	V	K	N	D	A	A	L	R	E	A	K	P	D	I	R	L	I	D	L	T	P	A	A	.	.	.	.	I	G	P	Y	C	V	P	V	V	N	L	E	A	N	V	D	Q	L	N	V	N	M	V	T	C	G	G	Q	A	T	I	P	M	V	A	A	V	S	R
Query Conservation																																							.	.	.	.
Alig confidence																							.	.															.	.	.	.
Template Conservation																							.	.
Template Sequence		D	A	D	I	V	V	D	G	A	P	K	K	I	G	K	Q	N	L	E	N	I	.	.	Y	K	P	H	K	V	K	A	I	L	Q	G	G	E	K	A	K	D	V	E	D	N	F	N	A	L	W	S	Y	N	R	C	Y	G	K	D	Y	V	R	V	V	S	C	N	T	T	G	L	C	R	I	L	Y	A	I	N	S
Template Known Secondary structure		G		S								T	T									T	.	.	T	T	T	T	T							T	T	S		G	G	G	S	S					T	T	T	T	T	T	T	T	T	T		S																					T
Template Predicted Secondary structure																							.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.			.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		146	.	.	.	150	.	.	.	.						.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.			.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.		.	.	.
Predicted Secondary structure											.	.	.	.	.																												.	.																																		.
Query SS confidence											.	.	.	.	.																												.	.																																		.
Query Sequence		V	A	R	V	H	Y	A	E	I	.	.	.	.	.	I	A	S	I	A	S	K	S	A	G	P	G	T	R	A	N	I	D	E	F	T	E	T	T	S	R	A	.	.	I	E	V	V	G	G	A	A	K	G	K	A	I	I	V	L	N	P	A	E	P	P	L	M	M	R	D	T	V	Y	V	L	S	.	D	E	A
Query Conservation											.	.	.	.	.																												.	.																																		.
Alig confidence											.	.	.	.	.																												.	.																																		.
Template Conservation
Template Sequence		I	A	D	I	K	K	A	R	I	V	L	V	R	R	A	A	D	P	N	D	D	K	T	G	P	V	N	A	I	T	P	N	P	V	T	V	P	S	H	H	G	P	D	V	V	S	V	V	P	E	F	E	G	K	I	L	T	S	A	V	I	V	P	T	T	L	M	H	M	H	T	L	M	V	E	V	D	G	D	V
Template Known Secondary structure		T	S													S	S		T	T		S	S				S	S					S	S	S	S	S	S		T										G	G	G	T	T	S									S			S												S
Template Predicted Secondary structure
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
		218	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	Q	D	D	I	E	A	S	I	N	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	R	D	D	I	L	E	A	I	K	K
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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