Job Description P77580 Confidence 90.28% Date Thu Jan 5 12:30:45 GMT 2012 Rank 264 Aligned Residues 91 % Identity 16% Template c2uyyD_ PDB info PDB header:cytokine Chain: D: PDB Molecule:n-pac protein; PDBTitle: structure of the cytokine-like nuclear factor n-pac Resolution 2.5 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	K	R	K	V	A	I	I	G	S	G	N	I	G	T	D	L	M	I	K	I	L	R	H	G	Q	H	L	E	M	A	V	M	V	G	I	D	P	Q	S	D	G	L	A	R	A	R	R	M	G	V	A	T	T	H	E	G	V	I	G	L	M	N	M	P	E	F	A	D	I	D	I	V	F	D	A	T	S	A	G
Query Conservation
Alig confidence																									.				.	.	.	.																																	.	.	.	.	.	.
Template Conservation																									.				.	.	.	.																																	.	.	.	.	.	.
Template Sequence		T	D	K	K	I	G	F	L	G	L	G	L	M	G	S	G	I	V	S	N	L	L	K	.	M	G	H	.	.	.	.	T	V	T	V	W	N	R	T	A	E	K	C	D	L	F	I	Q	E	G	A	R	L	G	R	T	P	A	E	V	V	S	T	.	.	.	.	.	.	C	D	I	T	F	A	C	V	S	D	P
Template Known Secondary structure			S	S								S													.	T	T		.	.	.	.							S	S	G	G	G	G						T	T					S									.	.	.	.	.	.		S							S	S
Template Predicted Secondary structure																									.				.	.	.	.																																	.	.	.	.	.	.
Template SS confidence
		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.		.	290	.					.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.							.	.	.	.	.	.	330	.	.	.	.
		82	.	.	.	.	.	.						.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
Predicted Secondary structure									.	.	.	.	.
Query SS confidence									.	.	.	.	.
Query Sequence		A	H	V	K	N	D	A	.	.	.	.	.	A	L	R	E	A	K	P	D	I	R	L	I	D	L	T
Query Conservation									.	.	.	.	.
Alig confidence									.	.	.	.	.
Template Conservation
Template Sequence		K	A	A	K	D	L	V	L	G	P	S	G	V	L	Q	G	I	R	P	G	K	C	Y	V	D	M	S
Template Known Secondary structure										S	T	T		G	G	G	G			T	T							S
Template Predicted Secondary structure
Template SS confidence
		335	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions