Job Description P77580 Confidence 98.52% Date Thu Jan 5 12:30:45 GMT 2012 Rank 28 Aligned Residues 246 % Identity 17% Template c2pkrI_ PDB info PDB header:oxidoreductase Chain: I: PDB Molecule:glyceraldehyde-3-phosphate dehydrogenase aor; PDBTitle: crystal structure of (a+cte)4 chimeric form of2 photosyntetic glyceraldehyde-3-phosphate dehydrogenase,3 complexed with nadp Resolution 2.40 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.		.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
Predicted Secondary structure																							.																																																	.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.																																																	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	R	K	V	A	I	I	G	S	G	N	I	G	T	D	L	M	I	K	I	L	.	R	H	G	Q	H	L	E	M	A	V	M	V	G	I	D	P	Q	S	D	G	L	A	R	A	R	R	M	G	V	A	T	T	H	E	G	V	I	G	L	M	N	M	P	E	F	A	D	I	.	.	.	.	.	.	.	.	.	.
Query Conservation																							.																																																	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.																.								.	.																								.	.	.	.	.	.	.	.	.	.
Template Conservation																																							.								.	.
Template Sequence		K	L	K	V	A	I	N	G	F	G	R	I	G	R	N	F	L	R	C	W	H	G	R	K	D	S	P	L	D	V	V	V	I	N	D	T	G	.	G	V	K	Q	A	S	H	.	.	L	L	K	Y	D	S	I	L	G	T	F	D	A	D	V	K	T	A	G	D	S	A	I	S	V	D	G	K	V	I	K	V	V
Template Known Secondary structure											S												T		S	S		S									T	T	.								.	.						T	T	T		S		S	S						T	T	S					T	T
Template Predicted Secondary structure																																							.								.	.
Template SS confidence
		0	.	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.		.	.	.	40	.	.	.			.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
																	72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.			.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.		.	.	.	.	130	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																					.	.																			.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																					.	.																			.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	I	V	F	D	A	T	S	A	G	A	H	V	K	N	D	A	A	L	R	E	A	K	P	D	I	R	L	I	D	L	T	P	A	A	I	.	.	G	P	Y	C	V	P	V	V	N	L	E	A	N	V	D	Q	L	N	.	V	N	M	V	T	C	G	G
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																					.	.																			.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.													.	.																			.
Template Conservation																																							.	.
Template Sequence		S	D	R	N	P	V	N	L	P	W	G	D	M	G	I	D	L	V	I	E	G	T	G	V	F	V	D	R	D	G	A	G	K	H	L	Q	A	.	.	G	A	K	K	V	L	I	T	A	P	G	K	G	D	I	P	T	Y	V	V	G	V	N	E	E	G	Y	T	H	A	D	T	I	I	S	N	A	S	C	T	T
Template Known Secondary structure				S		G	G	G	S						T								S	S	S			B					T					T	.	.	T		S					S	S			B	S	S			B			T	T	T	T	G	G	G			T	T		S
Template Predicted Secondary structure																																							.	.
Template SS confidence
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.			.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.														.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	A	T	I	P	M	V	A	A	V	S	R	V	A	R	V	H	Y	A	E	I	I	A	S	I	A	S	K	S	A	G	.	.	.	.	.	.	.	.	.	.	.	.	.	P	G	T	R	A	N	I	D	E	F	T	E	T	T	S	R	A	I	E	V	V	G	G	A	A	K	G	K	A	I	I	V	L	N	P	A
Query Conservation																																	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	C	L	A	P	F	V	K	V	L	D	Q	K	F	G	I	I	K	G	T	M	T	T	T	H	S	Y	T	G	D	Q	R	L	L	D	A	S	H	R	D	L	R	R	A	R	A	A	C	L	N	I	V	P	T	S	T	G	A	A	K	A	V	A	L	V	L	P	N	L	K	G	K	L	N	G	I	A	L	R	V
Template Known Secondary structure															T															T	T	S		S	S	S				S	S	T	T	T	T	S		T	T	T																		G	G	G	T	T	T
Template Predicted Secondary structure
Template SS confidence
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
		201	.	.	.	.	.	.	.	.	210	.	.	.	.		.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
Predicted Secondary structure																.
Query SS confidence																.
Query Sequence		E	P	P	L	M	M	R	D	T	V	Y	V	L	S	.	D	E	A	S	Q	D	D	I	E	A	S	I	N	E	M	A	E	A	V	Q	A	Y	V	P	G	Y	R	L	K	Q	R	V	Q	F	E	V	I	P	Q
Query Conservation																.
Alig confidence																.
Template Conservation
Template Sequence		P	T	P	N	V	S	V	V	D	L	V	V	Q	V	S	K	K	T	F	A	E	E	V	N	A	A	F	R	E	S	A	D	N	E	L	K	G	I	L	S	V	C	D	E	P	L	V	S	I	D	F	R	C	T
Template Known Secondary structure		S		S	S											S	S																	T	T	T	T	T	T						S				G	G	G	G	T	T
Template Predicted Secondary structure
Template SS confidence
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions